| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5538 |
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| Symbol | |
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| ID | 5751158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6152731 |
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| End bp | 6153384 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641300671 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001566552 |
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| Protein GI | 160900970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.94282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATATG TAATCTCGCT CATGGGGCCG CTGTCCGCCG GCGCCCTGGT CACCCTCAAG
CTCTTCGTCA TCACCCTGGC GCTGTCCATT CCCCTGGGAC TGTCGCTGGC GCTGATGCGC
ATCTCCCGCT TTCCCGCCCT GAGCCGGCTG GTAGGCGGAT ACATCTGGCT GATGCGCGGC
ACGCCGCTGA TGCTGCAGAT GCTGTTCATC TACTTCGCGC TGCCCTTCGT GCCCGTGATC
GGCGTGCGCC TGCCCGATTT CCCTGCCGCC GTCGTCGCCT TCGCGCTGAA CTACGCCGCC
TACTTCGCCG AAATCTTCCG CGCGGGCATC CAGTCCGTGG ACCGCGGCCA GTATGAAGGT
GCCAAGGTGC TGGGCATGAG CTACGGCCAG ACCATGCGCC GCATCATCCT GCCGCAGATG
TGGGCGCGCA TCATCCCGCC TGTGAGCAAC GAGACCATCA CCCTGGTCAA GGACACCTCG
CTCATCTACG TGCTGGCCCT GAATGACCTG CTGCGCGCCG CGCGCGGCAT CGTGCAGCGC
GATTTCACCA TCACGCCTTT CGTGGTGGCC GCAGGCTTCT ATCTGGTCAT GACGCTGGTG
CTGACCTGGA TCTTCCAATA CCTAGAAAAA CGCCATGCAA AGTATGACGC GTGA
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| Protein sequence | MEYVISLMGP LSAGALVTLK LFVITLALSI PLGLSLALMR ISRFPALSRL VGGYIWLMRG
TPLMLQMLFI YFALPFVPVI GVRLPDFPAA VVAFALNYAA YFAEIFRAGI QSVDRGQYEG
AKVLGMSYGQ TMRRIILPQM WARIIPPVSN ETITLVKDTS LIYVLALNDL LRAARGIVQR
DFTITPFVVA AGFYLVMTLV LTWIFQYLEK RHAKYDA
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