Gene Daci_5532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5532 
Symbol 
ID5751152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6147892 
End bp6148533 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID641300665 
Producttoluene tolerance family protein 
Protein accessionYP_001566546 
Protein GI160900964 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.602708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC GACGTGCCTG GAGCGCTGCC GCGGCAGCCG TGCTGGCCAT GGGAACCTGG 
GGCGCTGCGC TGCCCGTCCA CGCGGCCGAC GAAACCCCTG ATGCGCTGAT CAAGCGTGTC
TCCACCGACG TGCTGGAAAC CATCAAGAAG GACCCCTCGC TGCGCGAGGG CGATGTCTCC
AAGGTCAATG CGCTGGTCAA TGACAAGGTC ATGCCTTATG TGAATTTCCG CCGCATGACC
TCGGCTTCGG TGGGCCCGGC CTGGCGCCAG GCCACGCCTG CACAGCGCGA GAAGCTGGAG
ACCGAGTTCA AGGCCCTGCT GATACGCACC TACTCGGGCG CGCTGACCCA GGTCAGCAAC
CAGACCATCA ATGTCAAGCC GGTGCGTGCT GCGCCCGGCG ACATCGATGT GCTGGTACGC
ACCGAAGTGC TGGGCCGCGG CGAGCCCGTG CAGCTGGACT ACCGGCTCGA GAAGTCCGGC
GACGGCTGGA AGATCTACAA CCTGAACGTG CTGGGCGTGT GGCTGGTGGA AACCTACCGC
AACCAGTTCA GCCAGGAAAT CAATGCCCGT GGCATCGACG GCCTGATCGA GACCCTTGCC
ACGCGCGGCA AGATGCCTGC CACGCCGGCC TCCAAGGGCT GA
 
Protein sequence
MINRRAWSAA AAAVLAMGTW GAALPVHAAD ETPDALIKRV STDVLETIKK DPSLREGDVS 
KVNALVNDKV MPYVNFRRMT SASVGPAWRQ ATPAQREKLE TEFKALLIRT YSGALTQVSN
QTINVKPVRA APGDIDVLVR TEVLGRGEPV QLDYRLEKSG DGWKIYNLNV LGVWLVETYR
NQFSQEINAR GIDGLIETLA TRGKMPATPA SKG