Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5529 |
Symbol | |
ID | 5751149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6145835 |
End bp | 6146590 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641300662 |
Product | ABC-2 type transporter |
Protein accession | YP_001566543 |
Protein GI | 160900961 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.188866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCT GGCAGACCCT GCTCAAGAAG GAAGTGCTGC GTTTCTGGAA GGTCAGCTTC CAGACCGTGG CCGCACCCGT GCTCACGGCC GTGCTCTATC TGCTGATCTT CGGCCATGTG CTCGAAGGCC GGGTGCTGGT CTACGACCGC ATCAGCTACA CGGCCTTCCT GATCCCCGGC CTGGTGATGA TGAGCGTGCT GCAGAACGCC TTCGCCAACA GCTCATCGAG CCTGGTGCAG AGCAAGATCA TGGGCTCCAT GGTCTTCGTG CTGCTCACGC CGCTGTCGCA CTGGGCGTGG TTTGGCGCCT ACGTGGGCGC TTCGGTGCTG CGCGGGCTGC TGGTGGGCGT GGGCGTTTTC ATCGTCACGC TGTACTTCGC CATTCCCGAA TTCACGGCGC CGCTGTGGAT TCTGGTCTTC GGCCTGCTGG GCGCGGCGCT GCTGGGCACG CTGGGCGTGA TCGCCGGCCT GTGGGCGGAC AAGTTCGACC AGATGGCGGC CTTCCAGAAC TTCCTGATCA TGCCCATGAC GTTCCTGTCG GGCGTGTTCT ATTCCATCCA GTCGCTGCCG CCTTTTTGGC AAAAAGTCAG CCATCTGAAC CCGTTTTTCT ACATGATTGA TGGCTTTCGC TACGGCTTCT TCGGCCAGAG CGACGTGTCG CCCTGGGTCA GCCTGGCCAT CGTCGGCTCG GCCTGGCTGG CGGTGAGCGC CCTGGCCGTG CACCTGCTGC GCATCGGCTA CAAGATCCGC GGCTGA
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Protein sequence | MNGWQTLLKK EVLRFWKVSF QTVAAPVLTA VLYLLIFGHV LEGRVLVYDR ISYTAFLIPG LVMMSVLQNA FANSSSSLVQ SKIMGSMVFV LLTPLSHWAW FGAYVGASVL RGLLVGVGVF IVTLYFAIPE FTAPLWILVF GLLGAALLGT LGVIAGLWAD KFDQMAAFQN FLIMPMTFLS GVFYSIQSLP PFWQKVSHLN PFFYMIDGFR YGFFGQSDVS PWVSLAIVGS AWLAVSALAV HLLRIGYKIR G
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