Gene Daci_5529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5529 
Symbol 
ID5751149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6145835 
End bp6146590 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID641300662 
ProductABC-2 type transporter 
Protein accessionYP_001566543 
Protein GI160900961 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.188866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCT GGCAGACCCT GCTCAAGAAG GAAGTGCTGC GTTTCTGGAA GGTCAGCTTC 
CAGACCGTGG CCGCACCCGT GCTCACGGCC GTGCTCTATC TGCTGATCTT CGGCCATGTG
CTCGAAGGCC GGGTGCTGGT CTACGACCGC ATCAGCTACA CGGCCTTCCT GATCCCCGGC
CTGGTGATGA TGAGCGTGCT GCAGAACGCC TTCGCCAACA GCTCATCGAG CCTGGTGCAG
AGCAAGATCA TGGGCTCCAT GGTCTTCGTG CTGCTCACGC CGCTGTCGCA CTGGGCGTGG
TTTGGCGCCT ACGTGGGCGC TTCGGTGCTG CGCGGGCTGC TGGTGGGCGT GGGCGTTTTC
ATCGTCACGC TGTACTTCGC CATTCCCGAA TTCACGGCGC CGCTGTGGAT TCTGGTCTTC
GGCCTGCTGG GCGCGGCGCT GCTGGGCACG CTGGGCGTGA TCGCCGGCCT GTGGGCGGAC
AAGTTCGACC AGATGGCGGC CTTCCAGAAC TTCCTGATCA TGCCCATGAC GTTCCTGTCG
GGCGTGTTCT ATTCCATCCA GTCGCTGCCG CCTTTTTGGC AAAAAGTCAG CCATCTGAAC
CCGTTTTTCT ACATGATTGA TGGCTTTCGC TACGGCTTCT TCGGCCAGAG CGACGTGTCG
CCCTGGGTCA GCCTGGCCAT CGTCGGCTCG GCCTGGCTGG CGGTGAGCGC CCTGGCCGTG
CACCTGCTGC GCATCGGCTA CAAGATCCGC GGCTGA
 
Protein sequence
MNGWQTLLKK EVLRFWKVSF QTVAAPVLTA VLYLLIFGHV LEGRVLVYDR ISYTAFLIPG 
LVMMSVLQNA FANSSSSLVQ SKIMGSMVFV LLTPLSHWAW FGAYVGASVL RGLLVGVGVF
IVTLYFAIPE FTAPLWILVF GLLGAALLGT LGVIAGLWAD KFDQMAAFQN FLIMPMTFLS
GVFYSIQSLP PFWQKVSHLN PFFYMIDGFR YGFFGQSDVS PWVSLAIVGS AWLAVSALAV
HLLRIGYKIR G