| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5505 |
|---|
| Symbol | |
|---|
| ID | 5751125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6109330 |
|---|
| End bp | 6110391 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641300638 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_001566519 |
|---|
| Protein GI | 160900937 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.32851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT CCACACACCC CCAAGCCGCG ATTGCCATCA CCCAGGGCGA CTCTGCAGGC
GTAGGGCCTG AGACCATCGC CAAGGCATTC ATGGAAGTGC CCGAGGTCAT GCGCGACTGC
TTCGTCGTCG GCGAGTTGCA GACGCTGCGC CGGGCAGCCG CCGTGGCGGC GCGTGCGCGC
GATGGCGACA ACGCCATTCC CATGCCCGTA GCCGTCATCG AGTCGGCTGA GCAACTGTGG
CAGGTGCCGC CCCATTGCAT CCCTTTGCTG GAGCTGCCCG GGCTGCCCGG TCCTGCGCCC
TGGGGCCAGG TGAGTGCCAG CGCCGGTGAT GCGGCTGCGC GCTGCGTGGT CTGGGCCGCG
CGGGCTGCCT TGCGAGGCGA AATCGCGGCT CTGGTGACGG CGCCCCTGCA CAAGGAGGCG
CTGCATGCTG CGGGCGTGGA CTTTCCTGGT CATACCGAGC TGCTGCAGTT CGAGGCTGCG
CAGCATGCGG GTGTGGGCCT GGACCGCATG CCGGTACGCA TGATGCTGGC CAACGATGAG
CTGCGGACGG TGCTGGTCAG CATCCATACC TCGCTGCGCA AGGCGATCGA TGCGGTAACG
AAGGACAACC TGCTGCAGAC CTTGCGCATC ACGCATGAAG CCCTGTCTCG CAGCCTGGGC
CGCCCGCCGC GGATCGGTGT GGCAGGGCTG AACCCGCATG CGGGCGAGGG CGGCCTGTTC
GGCAGCGAGG AGGTCGAGAT CATTGCCCCG GCCATCACCC AGGCGCGCGC CGAGGGCCTG
GACGCCCATG GACCTTTTGC GCCCGATACG GTGTTCATGC GCGCCCGCAA TGCTCCCGGC
CACCCCGGTG AGTTCGACGT GGTGCTGGCC ATGTACCACG ACCAGGGACT GATTCCCGTG
AAGTACCTGG GCGTGGAAAA GGGCGTGAAT GTCACATTGG GGCTGCCGCT GGTGCGCACC
AGCCCGGACC ACGGCACGGC TTTCGATATT GCAGGGCAGG GCCTTGCAGA GGCGAGCAGC
CTGATTGAGT CCGTGCGAAT GGCGCGCAAA TTGGCGGCTT GA
|
|---|
| Protein sequence | MPDSTHPQAA IAITQGDSAG VGPETIAKAF MEVPEVMRDC FVVGELQTLR RAAAVAARAR
DGDNAIPMPV AVIESAEQLW QVPPHCIPLL ELPGLPGPAP WGQVSASAGD AAARCVVWAA
RAALRGEIAA LVTAPLHKEA LHAAGVDFPG HTELLQFEAA QHAGVGLDRM PVRMMLANDE
LRTVLVSIHT SLRKAIDAVT KDNLLQTLRI THEALSRSLG RPPRIGVAGL NPHAGEGGLF
GSEEVEIIAP AITQARAEGL DAHGPFAPDT VFMRARNAPG HPGEFDVVLA MYHDQGLIPV
KYLGVEKGVN VTLGLPLVRT SPDHGTAFDI AGQGLAEASS LIESVRMARK LAA
|
|---|
| |