Gene Daci_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5500 
Symbol 
ID5751120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6105145 
End bp6105756 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content60% 
IMG OID641300633 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001566514 
Protein GI160900932 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.212095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTGC TTTATTCGGG AACGACCTGC CCCTTTTCAC ACCGTTGCCG TTTCGTCCTG 
TTCGAAAAAG GCATGGACTT CGAGATCCGC GATGTGGACC TGTTCAGCAA GCCTGAAGAC
ATCAGCGTGA TGAACCCGTA CGGCCAGGTG CCCATCCTGG TCGAGCGCGA CCTGATCCTG
TACGAATCGA ACATCATCAA CGAGTACATC GACGAGCGCT TCCCGCATCC CCAGCTGATG
CCCGGCGACC CGGTGGACCG CGCCCGCGTG CGCCTGTTCC TGCTGAACTT CGAGAAGGAA
CTGTTCGTGC ACGTGAGCAC GCTCGAGGAG CGCAACGTCA AGGGCAACGA AAAGGCCATC
GAAAAGGCGC GCGCCCACAT CCGCGACCGC CTGACGCAAC TGGCTCCCGT GTTCCTCAAG
AACAAGTACA TGCTGGGCGA GAACTTCTCC ATGCTGGACG TGGCCATTGC CCCGCTGCTG
TGGCGCCTGG ACTACTACGG CATCGAGGTT TCCAAGAACG CCGCCCCGCT GCTCAAGTAC
GCCGAGCGCA TCTTCTCGCG CCCTGCCTAC ATCGAAGCGC TGACGCCTTC CGAGAAGGTG
ATGCGCAAGT AA
 
Protein sequence
MMVLYSGTTC PFSHRCRFVL FEKGMDFEIR DVDLFSKPED ISVMNPYGQV PILVERDLIL 
YESNIINEYI DERFPHPQLM PGDPVDRARV RLFLLNFEKE LFVHVSTLEE RNVKGNEKAI
EKARAHIRDR LTQLAPVFLK NKYMLGENFS MLDVAIAPLL WRLDYYGIEV SKNAAPLLKY
AERIFSRPAY IEALTPSEKV MRK