Gene Daci_5499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5499 
Symbol 
ID5751119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6104511 
End bp6105041 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID641300632 
Productstringent starvation protein B 
Protein accessionYP_001566513 
Protein GI160900931 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.276517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC CCGAAGCAAC TTCCACCCGC CCCTACCTGA TCCGGGCCCT GTACGAGTGG 
TGCACCGACA ACGGCTTCAC ACCCCACATC GCAGTGCGCG TGGACCGCAA CGTGCAGGTG
CCGCGCGAGT TCGTGCGCGA CGGCGAGATC GTGCTCAACG TCAGCTACGA CGCCACCAGC
GGCCTGCAGA TGGGCAATGA CTTCATCAGC TTCACGGCCC GCTTTGGCGG CAAGCCACGC
GAAATCATGG TGCCTGTCGA GCAGGTGATG GCCATCTACG CACGGGAGAC CGGGCAAGGC
ATGGCTTTCC CGGCGCCGGA GTCGGATGCC GACGCCGACA ACGAAGTTTC GATGGAGCAG
GAATCCGATG AGCCCGTGTC GCAGGACGCA GTTGCTGAAG TGCCGGCCGA GCCCGCTGCC
GACGAACGCG TGGTGCAGCT GGTGAGTATC CAGAACGAGG GCGATGATGA AGAGCCCCCG
CGCACGCCGC CGCCCTCGGG CACGCGGCCC TCGCTGAAGC TGGTGAAGTA G
 
Protein sequence
MTAPEATSTR PYLIRALYEW CTDNGFTPHI AVRVDRNVQV PREFVRDGEI VLNVSYDATS 
GLQMGNDFIS FTARFGGKPR EIMVPVEQVM AIYARETGQG MAFPAPESDA DADNEVSMEQ
ESDEPVSQDA VAEVPAEPAA DERVVQLVSI QNEGDDEEPP RTPPPSGTRP SLKLVK