Gene Daci_5496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5496 
SymbolargJ 
ID5751115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6099520 
End bp6100752 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content65% 
IMG OID641300628 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_001566510 
Protein GI160900928 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.234235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.173999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGA ATCTCTCCGC TCCCGTGCAC GCCGACCTGT TGGCGATCAA CGGCGTTCGC 
ATCGGCGTCA CCGAAGCCGG TGTGCGCAAG GCCAACCGCA AGGACCTGTC CGTGTTCCTG
CTCGACGAGG GCGCTTCGGT GGCTGGCGTA TTCACGCAGA ACCGTTTCTG CGCAGCGCCT
GTGCAGGTCA GCCGCGAGCA TCTGGTTCAG ACAGCGGGCG CCATCCGTGC CATGGTCATC
AACACAGGCA ATGCCAATGC GGGCACTGGC GCCGACGGCC TGGCACGTGC GCGCCGTACC
TGCGCAGATC TGGCAGCGCT GCTGCAGCTC AAGCCCGAGC AGATCCTGCC GTTCTCCACT
GGCGTGATCA TGGAAGAGCT GCCTGTGGAC CGCATTGCAG CCGGCCTGCC GGCCGCCATT
GCCGCAGCCA AGGCCGACAA CTGGGGCACG GCTGCCGAGG GCATCATGAC CACCGACACC
CTGCCCAAGG CCTTCAGCCG GGCCGTGGAC ATTGGCGGCA AGCGCGTGAG CATCACCGGC
ATCAGCAAGG GCGCGGGCAT GATCCGCCCC AACATGGCGA CCATGCTGGG CTTTCTGGCC
ACCGATGCGG CCATCGCTCC CGAGCTGCTG CAGCCCCTGG TCAAGGAACT GGCCGACGGC
TCGTTCAACC GCGTGACCAT CGACGGCGAC ACATCGACCA ACGATTCCTT TGTGCTGGTG
GCCACGCACA AGGCCGGCAA TGCGCAGATC ACTTCGCTGA CCAGCGCCGA AGGCCAGGCC
CTGAAGGCTG CATTGCTGGA CGTGTCGCGT CTGCTGGCCC AGGCCATCGT GCGCGATGGC
GAAGGCGCCA CCAAGTTCAT CACCATCAAG GTGGAAGGTG GCAAGACCGA GGTCGAGTGC
CGCCTGGTGG CCTATTCCAT CGCGCATTCG CCCCTGGTCA AGACGGCGTT CTTTGCCAGC
GACCCGAATC TGGGCCGCAT CCTCGCGGCG GTGGGCTATG CTAGCATCGA CGATCTGGAC
CAGACCAAGA TCGACCTGTA CCTGAACGAT GTGCATGTCG CAGTCAATGG CGGCCGCAAC
CCTGCCTATC AGGAGGAAGA CGGCCAGCGC GTGATGAAGC AGCAGGAGAT CATCGTGCGC
GTGCTACTGG GCCGAGGGGA GGCCGAGCAG ACCGTGTGGA CCTGCGATCT GAGCCACGAC
TACGTGAGCA TCAACGCCGA CTACCGCTCC TGA
 
Protein sequence
MPVNLSAPVH ADLLAINGVR IGVTEAGVRK ANRKDLSVFL LDEGASVAGV FTQNRFCAAP 
VQVSREHLVQ TAGAIRAMVI NTGNANAGTG ADGLARARRT CADLAALLQL KPEQILPFST
GVIMEELPVD RIAAGLPAAI AAAKADNWGT AAEGIMTTDT LPKAFSRAVD IGGKRVSITG
ISKGAGMIRP NMATMLGFLA TDAAIAPELL QPLVKELADG SFNRVTIDGD TSTNDSFVLV
ATHKAGNAQI TSLTSAEGQA LKAALLDVSR LLAQAIVRDG EGATKFITIK VEGGKTEVEC
RLVAYSIAHS PLVKTAFFAS DPNLGRILAA VGYASIDDLD QTKIDLYLND VHVAVNGGRN
PAYQEEDGQR VMKQQEIIVR VLLGRGEAEQ TVWTCDLSHD YVSINADYRS