Gene Daci_5492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5492 
Symbol 
ID5751111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6096809 
End bp6097564 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID641300624 
Producthypothetical protein 
Protein accessionYP_001566506 
Protein GI160900924 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.340017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.223595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCTGT ACGAATATCC TTTCAATGAG CGCCTGAGGA CCTACCTCAG GCTGGAGCAG 
CTGTATCGCC GCCTGGGCGA GCTGCTGTCG CGCGCTCATT CCATCGATCA CCATTTCGCG
CTGGTCACCA TCTTCGAGAT CATGGACGTG GCAGCACGCA CCGACCTGAA GACGGACGTG
CTCAAAGACC TCGAACGCCA CAAGAGCCTG CTCGACAGCC TGCGCGGCAA CCCCGATATC
GCCGAGCACA TGCTCGACCA GGTGTCCCGC CATGTGGAGC AGTGCTTTGC CCAGCTCAAC
GCCCAGAACG GAAAGGCCGG CCAGTCCCTG ACCGACAACG AATGGCTGAT GGCCGTGCGC
AGCCGCATCG GCATCCCTGG CGGCACCTGC GGTTTCGATT TGCCGGCCTA TCACGCCTGG
CAGTTCCATG ACCCCCAGGT GCGCCTGCGT GATCTGGAGG ACTGGGCCAG CACACTGACC
CCGCTGGGTC AGTCGCTGCA GCTGCTGCTC AAGATGCTGC GCGAAACCGG CGTGCCGCAA
TGGGTGGCCG CAGAAAAAGG CGTGTTCCAG CAGGCCATGC CGCCCGGTCG CAGCTTTCAG
CTGCTGCGCC TTCGCATAGA CCCTGCGTTG AATCTTGTTC CGGAAATCAG CGGCAACCGC
CTGCTGGTTT CTGTGCGCCT GCTTCGCCCC GAGAGCGGCG CCAAACCCCA GCCTTGCAGC
GAAGATGCCT CGTTCGAGGT CACGCTTTGC AGCTGA
 
Protein sequence
MILYEYPFNE RLRTYLRLEQ LYRRLGELLS RAHSIDHHFA LVTIFEIMDV AARTDLKTDV 
LKDLERHKSL LDSLRGNPDI AEHMLDQVSR HVEQCFAQLN AQNGKAGQSL TDNEWLMAVR
SRIGIPGGTC GFDLPAYHAW QFHDPQVRLR DLEDWASTLT PLGQSLQLLL KMLRETGVPQ
WVAAEKGVFQ QAMPPGRSFQ LLRLRIDPAL NLVPEISGNR LLVSVRLLRP ESGAKPQPCS
EDASFEVTLC S