Gene Daci_5486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5486 
Symbol 
ID5751104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6090466 
End bp6090777 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content55% 
IMG OID641300617 
Productribosomal protein L21 
Protein accessionYP_001566500 
Protein GI160900918 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.145587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.514082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAG TCATAAAAAC CGGCGGCAAG CAGTATCGCG TTGCAGCCGG CGAAAAGATC 
AAGGTAGAAC AGATTGCTGC GGACGTAGGC CAAGAAGTTG TGATCGATCA GGTTCTGGCA
GTCGGCAACG GCGCTGAAAT CAAGGTCGGC ACACCTCTGG TGTCCGGTGC GTCTGTCAAG
GCAACCGTGG TTGCTCACGG CAAGCACGAC AAAGTGCACA TCTTCAAGAT GCGCCGTCGT
AAGCATTATC AGAAGCGCCA AGGCCATCGC CAGCAGTTCA CAGAGCTGCA GATCGTGGCG
ATCGCTGCTT AA
 
Protein sequence
MYAVIKTGGK QYRVAAGEKI KVEQIAADVG QEVVIDQVLA VGNGAEIKVG TPLVSGASVK 
ATVVAHGKHD KVHIFKMRRR KHYQKRQGHR QQFTELQIVA IAA