| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5481 |
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| Symbol | |
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| ID | 5751099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6085101 |
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| End bp | 6086846 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300612 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001566495 |
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| Protein GI | 160900913 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.808997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.705204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT CCCAATTTTT CATCTCCACC CTCAAGGAAG CTCCGGCCGA TGCCGAAGTG
GTCAGCCACA AGCTCATGAC GCGGGCCGGC CTGATCAAGA AGCTGGGCGC AGGCATCTAT
AACTACATGC CCATGGGGCT GCGCGTGATC CGCAAGGTCG AGGCCATCGT GCGCGAGGAA
ATGAACCGTG CCGGTGCCGT GGAAGTGACC ATGCCCGTGG TCCAGCCTGC CGAGATGTGG
GAGGAGACCG GCCGCTTCGA GAAGATGGGC CCCGAGCTGC TGCGCATCAA GGACCGCCAT
GGCCGTGACT TCGTGATCCA GCCCACCAGC GAAGAGGTGG TGACGGACAT TGCGCGCCAG
GAGCTCAAGA GCTACAAGCA GCTGCCCAAG AATTTCTACC AGATCCAGAC CAAGTTCCGC
GACGAGCGCC GCCCGCGCTT TGGCCTGATG CGCGGCCGCG AGTTCATCAT GAAGGACGCC
TATTCCTTCG ACAAGGACCG CGATACCGCC CAGATCAGCT ACCAGACCAT GCGCGCGGCC
TACAAGCGCA TCTTCGACCG CTTCGGCCTG CAATACCGTG CCGTGCGCGC CGACAGCGGC
GCCATCGGCG GTGATCTGAG CGAGGAATTC CAGGTGATCG CCTCCACGGG CGAAGACGCC
ATCGTCTACT GCCCCAGCAG CGACTACGCC GCCAATATCG AGAAGGCCGA GGCCCTGGCG
CCTGCAGGCC CCCGTCCCGC TGCAGCCCAG GCCATGGCCC GTGTGGCAAC GCCGGGCAAC
AGCACCTGCG AATCCGTGGC TGGCCAGCTG GGCCTGCCGC TGTCGCAGAC GGTGAAGTCC
CTGGTGCTGG CCACCGACAA GCTCGACGAC AAGGGCGATG TGGCGGGAAG CCAGGTCTGG
TTGCTGCTGC TGCGTGGCGA CCATGAGATG AACGAGATCA AGGTGGCCAA GGTGCCTGGC
CTGGACGTGG GCTTCCGCTT TGCCACTGTG GCCGAGATCG AGGAGCACTT CGGTTGCCAG
CCCGGCTACC TGGGCCCCAT CGGCCTGAAG AAGCCCGTGA AGCTGGTCGT GGACCGCGAG
GTCGCCGTGA TGGCCGACTG GGTCTGCGGC GCGAACGAGG CCGACTTCCA CATCACCGGC
GTGAACTTTG GCCGTGACCT GCCCGAGCCT GATGTCGTGG CCGACCTGCG CAATGTGGTG
GCCGGCGACA AGTCCCCCGA TGGCGCAGGC GAGCTGGCCA TCGAGCGCGG CATCGAAGTG
GGCCATGTGT TCTACCTGGG TACCAAGTAC TCCCAGGCCA TGAACGCCAC CTTCCTGGCC
GAGAACGGCA AGCCCTCGCT GTTTGAAATG GGTTGCTACG GCATTGGCGT GACACGCCTG
CCCGCTGCCG CCATCGAGCA GAACCATGAC GAGCGCGGCA TCATCTGGCC CGACGCGATT
GCACCCTTCA CCGTGGTGGT CTGCCCCATC GGCATGGACC GCAGCGAGCC CGTGAAGGAA
GCCGCCGAGA AGCTGCATGC CGAGTTGCTG GCACTGGGCG TGGACGTGAT CCTGGATGAC
CGCGGCGAAC GCCCGGGCGC CATGTTTGCC GACTGGGAAC TGATTGGCGT GCCGCACCGC
GTGGTGCTGT CCGACCGCGG CCTGAAGGAA GGCCAGGTCG AGTACCAGCA TCGCCGCGAC
ACGGAAGCGA CCAAGATGGC CGCTGCCGAT GTGCTGGGCC ATCTCAAGCA GAGGCTGGGT
CTGTGA
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| Protein sequence | MKASQFFIST LKEAPADAEV VSHKLMTRAG LIKKLGAGIY NYMPMGLRVI RKVEAIVREE
MNRAGAVEVT MPVVQPAEMW EETGRFEKMG PELLRIKDRH GRDFVIQPTS EEVVTDIARQ
ELKSYKQLPK NFYQIQTKFR DERRPRFGLM RGREFIMKDA YSFDKDRDTA QISYQTMRAA
YKRIFDRFGL QYRAVRADSG AIGGDLSEEF QVIASTGEDA IVYCPSSDYA ANIEKAEALA
PAGPRPAAAQ AMARVATPGN STCESVAGQL GLPLSQTVKS LVLATDKLDD KGDVAGSQVW
LLLLRGDHEM NEIKVAKVPG LDVGFRFATV AEIEEHFGCQ PGYLGPIGLK KPVKLVVDRE
VAVMADWVCG ANEADFHITG VNFGRDLPEP DVVADLRNVV AGDKSPDGAG ELAIERGIEV
GHVFYLGTKY SQAMNATFLA ENGKPSLFEM GCYGIGVTRL PAAAIEQNHD ERGIIWPDAI
APFTVVVCPI GMDRSEPVKE AAEKLHAELL ALGVDVILDD RGERPGAMFA DWELIGVPHR
VVLSDRGLKE GQVEYQHRRD TEATKMAAAD VLGHLKQRLG L
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