Gene Daci_5479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5479 
Symbol 
ID5751097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6082948 
End bp6084396 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content65% 
IMG OID641300610 
Producthypothetical protein 
Protein accessionYP_001566493 
Protein GI160900911 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATGTG TGGTCGAATG GTCACATCTT TCACATCCGG AAAAGCGCGC CTGCGCCCGC 
TTCTCCGCCC TGCCTATGAG TCTGTCCCAA AGTCTGCTGT TGATCGTCGC GCTGATATTG
ACCAGTGCCT TCTTCTCCGT GGCCGAGATC TCGCTGGCCG CCTCGCGGCG CCTGCGACTG
CGGCAGATGA TGGAGGACGG CGAACCCCGC GCCGAACTGG TCATGAAGAT GCAGGCCCAG
CCGGGCGAAT ATTTCACGGT CACGCAGATT GGGCTCAATG CCGTCGCCAT CCTGGGCGGC
GTGGTGGGCG AAGGGGCATT GACCCCCTAT CTGGCCGAGC TGCTGATGCT CTGGCTGCCT
GAAAGCCGTG CGCAGACCGT GGGCTTCCTG CTCTCGTTCG CCAGCGTCAC CTCCCTGTTC
ATCCTGTTCG CCGACCTGCT GCCCAAGCGC CTGAGCATGG CCGAGCCCGA GGCCCTTGCC
ATCCGCGTGC TGCGCCCCAT GCTCTGGTGC ATGGCGGTGC TCAAGCCCCT GGTCTGGTGC
TTCAACCACC TGGCCGACGC CGTTGCCAAG CTGTTCGGCC TGCCCACGGT GCGCGATGAC
CGCATCACCC ACGAAGACAT CCTGGCCATG ACCGAAGCCG GCGCACGCGC CGGCGTGCTG
GCCGCGAAGG AGCAGCAGGT GATCGCCAAC CTGTTCGAGC TGGACTCGCG CACCATCGGC
TCGGCCATGA CGCAGCGCGA CCGCATCGCC TACTTCCACC GCGACGACCC CGATGAACTG
ATCCGGGTCC GCATTGCCGA GGAGCCTTTT TCCACCTACC CCGTCTGCGA CGGCGACATC
GACCACATCG TCGGCTATGT CGATGCCAAG GACCTGTTCC AGCGCGCGCT GAACAACCAG
CCCCTGTCGC TCATGGACGA TTCGCTGGTC CACAAGGTGC TGGTCGTGCC GGACCGCCTG
ACGCTGGCCG AGGTGCTGGA GCAGTTCCGC CAGGTGCATG AGGACTTTGC CGTCATCGTC
AACGAATACA GCCTGGTGGT CGGCGTGGTC ACGCTCAATG ACGTGATGAG CACGGTGATG
GGCGGCCTGG TCAGCCCGGG CGACGAGGAA CAGATCCTGC GGCGCGACGA GAACTCCTGG
CTGATCGATG GCGTCACGCC GGTCGAGGAT GTGATGCAGG CCCTGGAGCT CGACGAGTTG
CCGCATTCCG AGGACTACGA AACCCTGGGC GGCTTTCTCA TGGTCATGCT GCGCCGCATT
CCCAGGCGCA CGGACACCGT GCAATGGGGC GGCTACCGCT TCGAGGTCAT GGACGTGGAC
AGCTACCGCA TCGACCAGGT GCTGGTCACG CGCATGTCGG GCAGCAGCCC GGCCGCTCCG
CCCAACGCAG GCGACACGGC TGCAGCCGTG GCCAAGGTGT CCAGCATGTC GCCGGACACG
TCGTCCTGA
 
Protein sequence
MRCVVEWSHL SHPEKRACAR FSALPMSLSQ SLLLIVALIL TSAFFSVAEI SLAASRRLRL 
RQMMEDGEPR AELVMKMQAQ PGEYFTVTQI GLNAVAILGG VVGEGALTPY LAELLMLWLP
ESRAQTVGFL LSFASVTSLF ILFADLLPKR LSMAEPEALA IRVLRPMLWC MAVLKPLVWC
FNHLADAVAK LFGLPTVRDD RITHEDILAM TEAGARAGVL AAKEQQVIAN LFELDSRTIG
SAMTQRDRIA YFHRDDPDEL IRVRIAEEPF STYPVCDGDI DHIVGYVDAK DLFQRALNNQ
PLSLMDDSLV HKVLVVPDRL TLAEVLEQFR QVHEDFAVIV NEYSLVVGVV TLNDVMSTVM
GGLVSPGDEE QILRRDENSW LIDGVTPVED VMQALELDEL PHSEDYETLG GFLMVMLRRI
PRRTDTVQWG GYRFEVMDVD SYRIDQVLVT RMSGSSPAAP PNAGDTAAAV AKVSSMSPDT
SS