Gene Daci_5475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5475 
SymbolhemA 
ID5751093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6078934 
End bp6080259 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content68% 
IMG OID641300606 
Productglutamyl-tRNA reductase 
Protein accessionYP_001566489 
Protein GI160900907 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCT GGGCACTCGG CATCAACCAC CACACGGCTC CGCTTGATAT GCGGGGACGT 
TTCGCGTTCG CGCTTGACCA GATCGTGCCC ACGCTGCAGG GCCTGCGCGA ATCGCTGACC
GGCCCCGGCC GCCAGCACAG CGCCGTCGAG ACCGCCATTC TCTCCACCTG CAACCGTACC
GAGATCTACT GCGCGGCCGA GATGCCGGCC ATGGACCACA CCCTGCACTG GCTGGCCAAC
AGCGGCGGCA TCTCGTCCGA ACTGCTGCGC TCGCACTCCT ATCTGCTGGA AGACGGCCAT
GTGGCGCGCC ATGCCTTCCG CGTGGCCAGC GGGCTCGATT CCATGGTGCT GGGCGAGGCC
CAGATCCTGG GCCAGATGAA GAACGCCGTG CGCGCCGCAG AGAACGCAGG CGCCCTGGGC
AGTACGCTGA ACCAGCTGTT CCAGCGCAGC TTCGCGGTGG CCAAGGAAGT GCGCAGCTCC
ACCGAGATCG GCGCCCACAG CATCAGCATG GCCGCTGCCG CCGTGCGGCT GGCCGGCCAG
CTGTTCGAAG ACCTGTCCCA GATCCGCGTG CTGTTCGTGG GCGCGGGCGA GATGATCGAG
CTGGTCTCCA CCCACTTCGC GGCCCGCCAC CCCAAGCAGA TCATGATCGC CAACCGCACG
CTGGAGCGCG GCGAGAAGCT GGCTGCCCAG TTCGGCGCCG GCACCATGCG GCTGGCCGAC
CTGCCCGACC ATCTGCATGA ATACGATGCC GTGATCAGCT GCACGGCGTC CAGCCTGCCC
ATCATCGGCC TGGGCGCCGT GGAAAGCGCG CTCAAGAAGC GCAAGCACCG CCCCATGTTC
ATGGTCGATC TGGCCGTGCC GCGCGATATC GAATCCGAGG TCAAGGACTT GCGCGACGTC
TACCTCTACA CCGTGGACGA CCTGGCCACC GTGGTGCGCA CGGGCCAGGC CCAGCGCCAG
GCAGCGGTCG AGCAGGCCGA AGTCATCATC GACCACGGCG TGCAAAGCTT CATGCACTGG
CTGGACCAGC GCCGCCCGCA GGCCGGCGTC GTGCCGCTGA TCCGCCAGCT CAACACCCAG
ACCGATGAAT GGCGTGCGCT GGAGATTGCG CGCGCCAAGA AGCTGCTGGC CAAGGGCGAA
GACATAGACA CCGTGCTGGA GGCCCTGTCG CGCGGCCTCA CGCAGAAAAT GCTGCACGGC
ACCCTGGCCG AGCTTCACAA GGGCGATGCC GACCAGCGCA GCCAGACCAT GGACACGGTC
TCGCGCCTGT TCCTGCGCTC GGCCCAAAGC GGCCCGCGCG GCACGGCCCC CGACAAGGCG
CTCTAG
 
Protein sequence
MAVWALGINH HTAPLDMRGR FAFALDQIVP TLQGLRESLT GPGRQHSAVE TAILSTCNRT 
EIYCAAEMPA MDHTLHWLAN SGGISSELLR SHSYLLEDGH VARHAFRVAS GLDSMVLGEA
QILGQMKNAV RAAENAGALG STLNQLFQRS FAVAKEVRSS TEIGAHSISM AAAAVRLAGQ
LFEDLSQIRV LFVGAGEMIE LVSTHFAARH PKQIMIANRT LERGEKLAAQ FGAGTMRLAD
LPDHLHEYDA VISCTASSLP IIGLGAVESA LKKRKHRPMF MVDLAVPRDI ESEVKDLRDV
YLYTVDDLAT VVRTGQAQRQ AAVEQAEVII DHGVQSFMHW LDQRRPQAGV VPLIRQLNTQ
TDEWRALEIA RAKKLLAKGE DIDTVLEALS RGLTQKMLHG TLAELHKGDA DQRSQTMDTV
SRLFLRSAQS GPRGTAPDKA L