| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5470 |
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| Symbol | |
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| ID | 5751088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6073057 |
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| End bp | 6075564 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300601 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001566484 |
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| Protein GI | 160900902 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC CCCGCCCGTA CCCTCTCCCG CTGCGCCCTA CGTGGGCGCA GGCCTTGCGC
CAATGCCTGG CCACCGGTCT GATGGTCCTG GCCATGCTGG TCCTCACTGC GCCCGCTCCG
GCCCATGCGC AGGACCGCGC GGCAGCGGCG GCCACGGCGG CACCCGACGG CCGGCCCGCC
CTGCCCAGCG TGGACGATCT GCGCAAGCAG CTGGACGCCA TTCCCCGCAA GCTGGCCGAG
GACGATGACG GCCGCAAGCT GCTGGACGAG GCTGCGGCCA TTGGCGCGGC GGCCGACCAG
GTGGCGGCCC GCCGCACCGA GGAACTGGCC GACATCGATT CACGCCTGGC CGGCCTGGGC
CCCGCGCCCG AAAAAGGCGC CCCTGCCGAT GCGCCCGATG TGGCCGAGCA GCGCGCCAGC
CTGGCCAGGC AGCGCAGTGC CGTGGATTCC GAACTCAAGC TCGCGCGGCT GGTGTCGGTC
GATGCCGACC AGCGCGGCAA CGAGCTGATA CGCCAGCGCC GCGAACAATT CCAGGCCGCA
CTGACGGCCC GCACCGACTC GCCGCTGGGC CGACCTTTCT GGCGCAACCT GCGCGCTGCC
GCGCCTTTGG ACGCGGCGCG CCTGCAGGGC CTGGGGCGCG AGCTGCGCCA GGCCGTCGCC
TCCACCATGG CGTCCGATCG CCGGGGCGGC TTCATCGCCA GCCTGGCCGC CGCCTTGCTG
ATCGCCCTGC TCGGCCCCTG GCTGGCCGAG CGTTTGCTGG TGCGCGCCGC GCCCGCGCGC
CTGCCCAGCG GCCGCCTGCG CCGCTCGTTG CGCGCGGCGG CCACCGTGCT GATCAACACG
CTGCTGATCG GCCTGGCAGC GCAACTGGCC TGGAGCGTGC TCAAGGCCGG CGATGGCTTC
AGCGAATCGC TGGACGCGCT GGCCAAGGCC AGTGTGCAGG TCACGCTGTT CGGCGCCTTT
GTGGTGTCGC TGGGCCAGAC CCTGCTGTCG CGCAGGCGCA GTTCCTGGCG CCTGCCCGGC
GTGTCGGACG AGCTGGCCGA GCGGCTCAGC CCCTATCCCT GGTGGATTGC CGCCGGAGCC
GCGCTCAACG GCCTGGTGAC CGAAGTCAAC GCCATCATCG GCGCCAGCCT GGCCGCCGAG
GTCACGGTGC ACGCCCTGTC GGCCCTGCTG ATTTCGGCCG TGGTCATGCT GGCCCTGCGG
CATCTGCGCG CGCCGGCGCC GGTCGCGCAG GAAGACGGCG CCCAGGCCGA GCCCGCACCG
CCCCGGCCCT TGTGGGTGGG CCTGCTCGTG GCCTGCGCGG CGGTGGCCAG CATTGCCACC
ATTGCGCTGG CCGTGACCGG CTACGTGGCG CTGGCCGGAA CGCTGGCGCG CCAGATGGTG
TGGACCGGCG TGGTCTTTGC CACCACCTAT CTGCTGTTCC AGCTGGGCGA CGATCTGTGC
GAGGCCCTGC TGTCGTCCAA GGGCAGCTTC GGCACCCGGC TGAACCAGAG CCTGGGCATC
GAGGGCCGGC TGCTGGACCA GGCCTCGGTC CTGGTCTCCG GCCTGCTGCG CGTGGCCCTG
TTGTTCTACA TGGTGATCGC CCTGCTGGCC CCGCTGGGCA CGGGGCCGGA CGAGGTGTTT
CGCCGCGGCA GCACGGTGAA CCACAGCCTC AAGGTGGGCG ACTTCACCAT GGCGCCGCAG
GCCCTGTTCA CCGCATTCGC CGTGATCGTC ACGGGCCTGA TCGTGATCCG CGTGATCAAG
CGCTGGCTGA CGGACCGCTA CTTCCCCAAC ACCTCGCTGG AGCCGGGCAT GCGCAGCTCC
ATCACCACGC TGCTGGGCTA TGTGGGCGGC ATCTTCGTGG TGGCCGTGGC GCTGGCGGGG
CTGGGCATCA GCGTGGAGCG CATTGCCTGG GTGGCCAGCG CGCTGTCGGT GGGCATTGGC
TTTGGCCTGC AGGCCATCGT GCAGAACTTC ATCTCGGGCC TGATCCTGCT GGCCGAGCGG
CCCGTGAAAG TGGGCGACTG GGTGGTGCTG GGCGATACCG AGGGCGACGT GCGCCGCGTC
AACGTGCGCG CCACCGAGAT CCAGCTGGGC GACCGCTCCA CCGTCATCGT GCCCAACTCG
GAATTCATCA CCAAGACCGT GCGCAACATG ACGCTGGCCG GCGCGCCCGG GCGCGTGCTG
CTGCGCCTGC CCGCACCGCT GGACACCGAT GCCGAACGCA TGCGCACCCT GATATTGGAA
GCCTTCCGCA CGCATGAAGG CATCCTGGAC ACGCCCGAGC CTGTGGTGCA GCTCGAAGGC
ATTGCCAACG GCACGCTGAC CTTTCTGGCA ATCGGCTACG TGGGCAACCC GCGCAATGCG
GGCGGGGTGC GCAGCGATGT GCTGTTCAGC ATCCTGGCAT CGCTCAAGGG CGCGGGCCTG
TACCTGTCGC CACCGGCCAC CACCTCGGTG GCGGCGCCGG TGTTGACAGG CATGCCGGGC
TTGCCAGGCA CGCCGCCCAT GCCCGGCGAC CCCGCCAGCC CGGCCTAG
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| Protein sequence | MTPPRPYPLP LRPTWAQALR QCLATGLMVL AMLVLTAPAP AHAQDRAAAA ATAAPDGRPA
LPSVDDLRKQ LDAIPRKLAE DDDGRKLLDE AAAIGAAADQ VAARRTEELA DIDSRLAGLG
PAPEKGAPAD APDVAEQRAS LARQRSAVDS ELKLARLVSV DADQRGNELI RQRREQFQAA
LTARTDSPLG RPFWRNLRAA APLDAARLQG LGRELRQAVA STMASDRRGG FIASLAAALL
IALLGPWLAE RLLVRAAPAR LPSGRLRRSL RAAATVLINT LLIGLAAQLA WSVLKAGDGF
SESLDALAKA SVQVTLFGAF VVSLGQTLLS RRRSSWRLPG VSDELAERLS PYPWWIAAGA
ALNGLVTEVN AIIGASLAAE VTVHALSALL ISAVVMLALR HLRAPAPVAQ EDGAQAEPAP
PRPLWVGLLV ACAAVASIAT IALAVTGYVA LAGTLARQMV WTGVVFATTY LLFQLGDDLC
EALLSSKGSF GTRLNQSLGI EGRLLDQASV LVSGLLRVAL LFYMVIALLA PLGTGPDEVF
RRGSTVNHSL KVGDFTMAPQ ALFTAFAVIV TGLIVIRVIK RWLTDRYFPN TSLEPGMRSS
ITTLLGYVGG IFVVAVALAG LGISVERIAW VASALSVGIG FGLQAIVQNF ISGLILLAER
PVKVGDWVVL GDTEGDVRRV NVRATEIQLG DRSTVIVPNS EFITKTVRNM TLAGAPGRVL
LRLPAPLDTD AERMRTLILE AFRTHEGILD TPEPVVQLEG IANGTLTFLA IGYVGNPRNA
GGVRSDVLFS ILASLKGAGL YLSPPATTSV AAPVLTGMPG LPGTPPMPGD PASPA
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