Gene Daci_5468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5468 
Symbol 
ID5751086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6071119 
End bp6072129 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content65% 
IMG OID641300599 
ProductABC transporter related 
Protein accessionYP_001566482 
Protein GI160900900 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCA TTTCCTTTCG CAACCTGATC AAGCGCTACG GCCAGGGCCC GTCGGCCAAC 
CAGGTACTGC ACGGCGTCAA CGCCGAAATC AAGGACGGCG AGTTCGTCGT CATCGTCGGC
CCTTCGGGCT GCGGCAAGTC CACCCTGCTG CGCATGGTGG CGGGCCTGGA GGAGATCTCC
GACGGCCAGC TGCTGATCGG CGACAAGGTG GTCAACGACG TGGAACCGGC CAAGCGCGAC
ATCGCCATGG TGTTCCAGAA CTATGCGCTG TACCCGCATA TGTCGAACTA CGAGAACATG
GCCTACGGCC TGAAGATCGC CAAGGTGCCG CCCGAGGAGA TCAAGCGCCG CGTGGACAAG
GCCGCCAAGA TCCTGGAGCT GTCGCACCTG CTGGACCGCA AGCCGCGCCA GCTGTCGGGT
GGCCAGCGCC AGCGCGTGGC CATGGGCCGC GCCATCGTGC GCCAGCCCAA GGTCTTCCTG
TTCGACGAGC CGCTGTCCAA CCTGGACGCC AAGCTGCGCG GCCAGACCCG CATCGAGATC
CAGAAGCTGC ACGCCGAGCT GGGCATCACC AGCCTGTTCG TGACCCACGA CCAGGTCGAG
GCCATGACCC TGGCCCAGCG CATGATCGTC ATGAACGGCG GCGTGATGGA GCAGTTCGGC
ACGCCCGAAG AGGTCTACCA CACGCCCGCC TCCACCTTCG TGGCCAGCTT CATCGGCTCG
CCCCCGATGA ACCTGCTCAA GAACGCGCCC GGCGGCACGG CCGGCCGTAT CCTGGGCATC
CGCCCCGAGC ACCTGGTCGT CGTCAGCGAA GGCGGCTGGG AAATCAAGGT GGACACCGTG
GAAATGCTGG GTGCCGAGCG CCTGGTCTAT GGTTCGCTCA ATGGCGAGAC GATGACGGTA
CGCATCGACG AAGGCGCGCC CTTCCCCAAG CCCGGCGAGA CCATGCGCGT GCGTCCTTCC
GAAGAGCGTC GCCTGCACTG GTTCGACGCA GAATCCGGAA AGCGGATCTG A
 
Protein sequence
MASISFRNLI KRYGQGPSAN QVLHGVNAEI KDGEFVVIVG PSGCGKSTLL RMVAGLEEIS 
DGQLLIGDKV VNDVEPAKRD IAMVFQNYAL YPHMSNYENM AYGLKIAKVP PEEIKRRVDK
AAKILELSHL LDRKPRQLSG GQRQRVAMGR AIVRQPKVFL FDEPLSNLDA KLRGQTRIEI
QKLHAELGIT SLFVTHDQVE AMTLAQRMIV MNGGVMEQFG TPEEVYHTPA STFVASFIGS
PPMNLLKNAP GGTAGRILGI RPEHLVVVSE GGWEIKVDTV EMLGAERLVY GSLNGETMTV
RIDEGAPFPK PGETMRVRPS EERRLHWFDA ESGKRI