Gene Daci_5467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5467 
Symbol 
ID5751085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6070181 
End bp6071029 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content63% 
IMG OID641300598 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001566481 
Protein GI160900899 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.96596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAC GCAGTCCCCT TCTCTCCTTT TTCTCGCACC TGATCATGGT GCTGGGCGTG 
ATCATCGTCG GCTTTCCGCT GTACCTGGCC TTCGTGGCCT CCACGCACAC GCCGCAGGAC
ATCATCCAGG TGCCCATGCC CCTGGTGCCC GGCAGCAACT TCTGGGAAAC CTACAAGGCC
GCGCTGTTCG GCGGCTCGGG CCCCGGCTCC AGCGCGCCCG TGGCACGCAT GATGTGGATC
AGCTTCGTCT CGGCCATGGT GATCACCGTG GGCAAGATCG CGATCTCGCT GCTGTCGGCC
TTCGCGCTGG TGTACTTCCG CTTCCCGTTC AAGAAGATCT GCTTCTGGCT GATCTTCGTG
ACCCTGATGC TGCCCGTGGA AGTGCGCATC GGCCCCACCT ACGAAGTCGT CTCCACGCTG
GGCATGCTCA ACAGCTACGC CGGCCTGACG ATTCCGCTGA TCGCCTCGGC CACGGCCACC
TTCCTGTTCC GCCAGTTCTT CCTGACGGTG CCGGACGAGC TGGTGGAAGC CGCCCGCATC
GACGGCGCAG GCCCCATGCG CTTCTTCAAG GATGTGCTGG TGCCGCTGTC CAAGACCTCG
ATCGCGGCGC TGTTCGTGAT CCAGTTCATC TACGGCTGGA ACCAGTACCT GTGGCCGCTG
CTCGTGACCA CCTCGGAAGA CATGTACCCC GTGGTCATCG GCATCAAGCG CATGGTGGCC
AGCGGCGATA CCGGCAATGA CTGGAACGTG GTGATGGCGA CGGCCCTGCT GGCCATGCTA
CCGCCCGCTG CCGTGGTGAT CCTGATGCAG CGCTGGTTCG TCAAGGGCCT GGTGGACACC
GAAAAGTAA
 
Protein sequence
MVERSPLLSF FSHLIMVLGV IIVGFPLYLA FVASTHTPQD IIQVPMPLVP GSNFWETYKA 
ALFGGSGPGS SAPVARMMWI SFVSAMVITV GKIAISLLSA FALVYFRFPF KKICFWLIFV
TLMLPVEVRI GPTYEVVSTL GMLNSYAGLT IPLIASATAT FLFRQFFLTV PDELVEAARI
DGAGPMRFFK DVLVPLSKTS IAALFVIQFI YGWNQYLWPL LVTTSEDMYP VVIGIKRMVA
SGDTGNDWNV VMATALLAML PPAAVVILMQ RWFVKGLVDT EK