| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5458 |
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| Symbol | ubiB |
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| ID | 5751076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6058294 |
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| End bp | 6059859 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300589 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_001566472 |
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| Protein GI | 160900890 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.245549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGT TTCTTCGCGG GCTGACCATC CTCTGGGTGG TGTTCCGCTA CGGACTCGAC
GAGCTGGTGC TGTCGAGCTT CGAGCATCCC TGGATGCGCC GCGCACGCGC GGTGCTCACG
CTGGGCCGGC GGCTGGACAA GCCGCGCGGC CAGCGCCTGC GCGAGGCCCT GGAGGAGCTG
GGGCCCATCT TCGTGAAGTT CGGCCAGGTG CTGTCCACGC GCAGCGACCT GATGCCGCCC
GACGTGGCCG AGGAGCTGGC CCGGTTGCAG GACCGCGTGC CGCCCTTCGA TTCGCAGATT
GCGGTGGACA CCATCGAGCG CGCCTTCCGC AAGAAGCTGG ACCAGATCTT CGTGAGCTTC
GAGCGCGAGC CGGTGGCCAG CGCCTCCATC GCCCAGGTGC ACTTTGCCGT GATCAGCGAC
CGCAACGGCG TGCAGCGCGA CGTGGCCGTC AAGGTGCTGC GTCCGGGCAT GAAGACCGTG
ATCGACAAGG ACCTGGCGCT GATGCACATG ATGGCGCGCT GGGTCGAGCG CCTGTCGGCC
GACGGCAAGC GCCTCAAGCC CCGCCAGGTC GTGGCCGAGT TCGACAACTA CCTGCACGAT
GAGCTGGACC TGATCCGCGA AGCCTCCAAC GCCGCGCAGC TGCGCCGCAA CATGGAAGGG
CTGGACCTGG TGCTGATCCC CGAGGTGTAC TGGGATTTCT GCCGCAGCGA CGTGATGGTC
ATGCAGCGCA TGACCGGCGT GCCCATCAGC CAGGTCGAGC GCCTGCGCGA AGCCGGCGTG
GACATCCCCA AGCTGGCACG CGACGGCGTG ACCATCTTCT TCACCCAGGT CTTTCGCGAT
GGCTTCTTTC ACGCCGACAT GCACCCGGGC AACATCATGG TCAGCCTGGA GCCCGAGACC
TTCGGGCGCT ACATCTCGCT GGACTTCGGC ATCGTCGGCA CGCTGACCGA GTACGACAAG
GAATACCTGG CGCAGAACTT CACGGCGTTC TTCCGCCGTG ACTACAAGCG CGTGGCCGAG
CTGCACATCG AAAGCGGCTG GGTGCCGCCG AGCACGCGCG TGGACGAGCT GGAGGCCGCC
ATCCGCGCCG TCTGCGAGCC GTACTTCGAC CGTCCGCTGG CCGAGATTTC GCTGGGCATG
GTGCTGATGC GCCTGTTCCA GACCTCGCGC CGCTTTCAAG TCGAGATCCA GCCGCAGCTG
GTGCTGCTGC AAAAGACGCT GCTCAACATC GAAGGCCTGG GGCGCCAGCT GGACCCCAAC
CTGGACCTGT GGAGCACGGC CAAGCCCTTC CTCGAAAAAT GGATGCTGGA CCAGATGGGC
CCGCAACGGC TGTGGCGCGA GCTGCTGGCC GAGGCGCCGC GCTATGCCAA GCTCATTCCC
GAGCTGCCGC GCCTGATCCA TCGCCGGCTC ACGCGCAACT CCGGCGAGCA CGACGAACTG
CTCAAGGAGC TGCTGCAGCA GCAAAAGCTC ACCAACCGCC TGTTGCAGGC CATCGTCAGC
GCCGGCATCG GCTTTGTCAT CGCGCTGATC CTGCTGCAAC TGGTGGTGCG GCTGCGCTGG
TACTGA
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| Protein sequence | MSRFLRGLTI LWVVFRYGLD ELVLSSFEHP WMRRARAVLT LGRRLDKPRG QRLREALEEL
GPIFVKFGQV LSTRSDLMPP DVAEELARLQ DRVPPFDSQI AVDTIERAFR KKLDQIFVSF
EREPVASASI AQVHFAVISD RNGVQRDVAV KVLRPGMKTV IDKDLALMHM MARWVERLSA
DGKRLKPRQV VAEFDNYLHD ELDLIREASN AAQLRRNMEG LDLVLIPEVY WDFCRSDVMV
MQRMTGVPIS QVERLREAGV DIPKLARDGV TIFFTQVFRD GFFHADMHPG NIMVSLEPET
FGRYISLDFG IVGTLTEYDK EYLAQNFTAF FRRDYKRVAE LHIESGWVPP STRVDELEAA
IRAVCEPYFD RPLAEISLGM VLMRLFQTSR RFQVEIQPQL VLLQKTLLNI EGLGRQLDPN
LDLWSTAKPF LEKWMLDQMG PQRLWRELLA EAPRYAKLIP ELPRLIHRRL TRNSGEHDEL
LKELLQQQKL TNRLLQAIVS AGIGFVIALI LLQLVVRLRW Y
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