| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5456 |
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| Symbol | |
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| ID | 5751074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6054591 |
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| End bp | 6056609 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300587 |
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| Product | hypothetical protein |
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| Protein accession | YP_001566470 |
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| Protein GI | 160900888 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAACTGAT TGCGAGGGCT CGCCGGCTGA AGCTGCGGCC TGTCGCTGGC
GTCCGGTTCC GATGGAGTTG GCTTGGAGGC GCCTTGCTTG TGCCAGCCCT GTGCGGCCAG
GTGGCAATGG CTGCGCCGAG GATCCCGGTC GCGCCGGTCA TTGTCTGGAG CGAGGACTTC
GAAAACCCGC AGACACCCCC CATCACCACG GAGGGGCGGG ATCTGCTGGC CTACCAGGGC
GCGGACCCTG CGGGGCAGAC GTACACCGCC GACCCCCTGT ACCGGATGAG CGCCAACCAG
TGCAATGGCA TAGTGACGTC CTTCAGCCAG GCTCCAGGTT CGACGGTGAT GATTGCGGCC
TGCTCGGACC ATGGCAATTG GAACAACCTG CAGCAGATGG CCGAGGTCGC CGGGCGCTAT
CAGGGCCAGA GTGCGGCGGC TGCACGCAAC AATCACGTCA TGGCAATGCT TACAGCGAAT
GGGACCTTTC CTGCTGGCGC AATTGCCTTT CGCACCGCCA CCAATATTGC ACAAAGTGCC
AGCAGCAGAT TCCTCACGGC CCGTACCGAT GTGGTGGCGA CCTTCTGCTC GTCGGGATTT
GTCGCCCCGC TGCTGCGTTT TTCCCTGATC AATGACGCTG GTACGGAGCT GCCCATCTCC
ACGAACGCGA TCAATCCATG CGTGGGTGGA CAGTCATTCA ATACAACACC TATCGGTATT
GCCGGCACCC AGACCGCTGT GGCCCAGACG GTGACTTCTC CGGGAGCACT GCTCTTCAGC
GGGACCTCTG TCGGGTTTGT TCTGCACAAC GACCAGACCA GCTCCATGGG CAACGATTCT
TCGATCGACA ACGCGCAGAT CATCGATGTC ACGCCGCAGC TGGACAAGGC CTTCTCGCCT
GCCAGCATTC AACTCGGCCA GGTCTCCCGG CTGACCATGA CCATCACCAA TACGACCGAT
CTGCTGCGCA AGCGAGGCTG GTCGTTTACC GACAACCTGC CTGCAGGACT GGTTGTCGAG
GGCAATGCCA GCACCACCTG CCCCGGCGCG ACCGTGCAGG CCGCAGCAGG CGGCAGCACC
GTGACCGTGT CCAACGGAGA CCTGGCCCAG GGTGCCGCCT TCTGCGAGGT GAGCCTCGAC
GTGCGCCCGA CCGCGACAGG CAGCTTCACC AATGGCGCTT CCAACCTCAG CCTGATCGGC
CTGAACCAGC CAGCCAGCCC GGCCGTGCTG GCGGTTGCGC CAGCGGCCGA CATGCAGGCC
ACCTCCATCA CGCTTCCCAC GACCATGACG GTGGGCGCGC CGGTCTCCGG CAGTTTCAGC
TGCACCAATG CCGGCCCCAG TGCGGCCACG GCGGCCTCGT GCGTGATCTC CGGCCTGCCC
GCCGGGGCGA CCACGTCCTG CACACCCAGC GTGCCCACGG CCTCGCCATT GGCATCGGGC
GGCAGCATCG CCTGCACAGT GCAGTTCACG CCCACCACAA CGGGCACCAT CGCGGCCTTG
GTGACGGCGA GCAGCAGCAC GGTGGATCCG GTGGCGGCCA ACAACACCAA GGCCCACCCC
TTCAACCCGG TGGAGCGGGC CGACATGCAG GCCACCAGCG TCACGCTGCC GGCCACCGCC
AACGTGGGTG TTCCCGTGAA GGGATCTTTC GTCTGCACGA ATGCCGGCCC CAATGCGGCG
GCCTTTGCCA ATTGCTCCAT CGCAGGGCTG CCGGCAGGTG CCAGCACCTC ATGCACGCCT
GCGGTACCGA CTGGCACACC GCTGGCCTCG GGTGCCAGCA TTTCCTGCAC GGTGAGCTTC
ACGCCCACCA CGCAGGGCAG CCTGACAGCC ACCGTGACGG CGGTCAGTGG AACCACGGAC
CCGGAGCCGG CCAACAATTC GCGGGATCAG GAATTGGTGG TTACTGCCGC ATTGACGCCG
GAGCCGGTCC CCGCCACCGG GGTGCCCGCC CTGGTGCTGA TGGGCCTTGC CATCATGCTG
GCCGGTATGG GGATGCAGCG GCGCCGGGCA CGGCGCTGA
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| Protein sequence | MKTLKLIARA RRLKLRPVAG VRFRWSWLGG ALLVPALCGQ VAMAAPRIPV APVIVWSEDF
ENPQTPPITT EGRDLLAYQG ADPAGQTYTA DPLYRMSANQ CNGIVTSFSQ APGSTVMIAA
CSDHGNWNNL QQMAEVAGRY QGQSAAAARN NHVMAMLTAN GTFPAGAIAF RTATNIAQSA
SSRFLTARTD VVATFCSSGF VAPLLRFSLI NDAGTELPIS TNAINPCVGG QSFNTTPIGI
AGTQTAVAQT VTSPGALLFS GTSVGFVLHN DQTSSMGNDS SIDNAQIIDV TPQLDKAFSP
ASIQLGQVSR LTMTITNTTD LLRKRGWSFT DNLPAGLVVE GNASTTCPGA TVQAAAGGST
VTVSNGDLAQ GAAFCEVSLD VRPTATGSFT NGASNLSLIG LNQPASPAVL AVAPAADMQA
TSITLPTTMT VGAPVSGSFS CTNAGPSAAT AASCVISGLP AGATTSCTPS VPTASPLASG
GSIACTVQFT PTTTGTIAAL VTASSSTVDP VAANNTKAHP FNPVERADMQ ATSVTLPATA
NVGVPVKGSF VCTNAGPNAA AFANCSIAGL PAGASTSCTP AVPTGTPLAS GASISCTVSF
TPTTQGSLTA TVTAVSGTTD PEPANNSRDQ ELVVTAALTP EPVPATGVPA LVLMGLAIML
AGMGMQRRRA RR
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