Gene Daci_5455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5455 
Symbol 
ID5751073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6054049 
End bp6054366 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID641300586 
ProductFmdB family regulatory protein 
Protein accessionYP_001566469 
Protein GI160900887 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTT ATGCATACAA GTGTGGCTCC TGCGGTCATG CCAAGGACGT GCTGCGGAAA 
ATCTCGGATG CTCCGCTGAC GACCTGCCCG GCCTGTGGTG CCGAGGCCTT TTCCAAGCAG
CTGACGGCTG CCGGCTTCCA GCTCAAGGGC TCGGGCTGGT ACGCGACCGA CTTCAAGAAC
AGCGGCAGCA AGAGCGCCGC CACGCCGGCT CCAGCGGCCG ACACCCAGGC CTCGGATACA
TCTGCCGCAC CTGCGACAAC TGCGCCTGCG CCTGCTGCGG CCCCCGCATC TGCTCCCGCA
CCCTCCACGG GCCATTAA
 
Protein sequence
MPIYAYKCGS CGHAKDVLRK ISDAPLTTCP ACGAEAFSKQ LTAAGFQLKG SGWYATDFKN 
SGSKSAATPA PAADTQASDT SAAPATTAPA PAAAPASAPA PSTGH