Gene Daci_5454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5454 
Symbol 
ID5751072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6053407 
End bp6054030 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID641300585 
Producthypothetical protein 
Protein accessionYP_001566468 
Protein GI160900886 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC TGCGCAAATG GCTGTTCGCC GGCCTGCTGG TGATTGTTCC TCTGGTGATC 
ACGCTGGGCG TGCTCAACTG GATCATCGGC ACGCTGGACC AGACGCTGGC CATCCTGCCC
GAGGCCTGGC ATCCGGACCG GCTGCTGGGT TTCCACATTC CCGGCTTCGG CGTGGTGCTC
ACGCTGCTGA TCCTGCTGGT GGTTGGCGCT GCGGCCAGCA ACTTCATCGG CCGCAAGCTT
GTCTCCTGGG GCGATGCGGT GGTCAGCCGC ATTCCCGTGG TGCGCTCCAT CTATTCCAGC
GTCAAGCAGG TGTCCGATAC CGTCTTCTCG GACAGTGGCA ATGCGTTTCG CACCGCCGTG
CTGGTGCAGT GGCCGCGCGA AGGCGTCTGG ACCGTGGCCT TCGTCACCGG CTCGCCCAGC
GGAGAGGTCG CCGCCTATCT GCGTGACGAA TACCTGAGCG TCTTCGTGCC GACAACGCCG
AACCCGACGG GCGGCTATTT CGTCATCGTT CGCAAGAGCG ATTGCATCGA GCTGGAAATG
AGCGTGGATG CCGCGCTCAA GTACATTGTT TCGATGGGCG TGGTGACTCC TCCGGATCTC
ACACTGCCCG CGGAATCCAA ATAA
 
Protein sequence
MSALRKWLFA GLLVIVPLVI TLGVLNWIIG TLDQTLAILP EAWHPDRLLG FHIPGFGVVL 
TLLILLVVGA AASNFIGRKL VSWGDAVVSR IPVVRSIYSS VKQVSDTVFS DSGNAFRTAV
LVQWPREGVW TVAFVTGSPS GEVAAYLRDE YLSVFVPTTP NPTGGYFVIV RKSDCIELEM
SVDAALKYIV SMGVVTPPDL TLPAESK