Gene Daci_5450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5450 
Symbol 
ID5751068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6049383 
End bp6050156 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID641300581 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001566464 
Protein GI160900882 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA ACGTGAAATC CTCCCACGAG GTGGACCCCG GCCCGTCCAT ACTGCGCGTC 
GCGACCTACA ACATCCACAA GGGCGTGCAA GGCATGGGTC CCGTGCGCCG CCTGGAAATC
CACAACCTGG GACACGCTGT GGAGCAGCTC GATGCCGACA TCGTCTGCCT GCAGGAAGTG
CGCAAGATGA ACCACAAGGA GGCCGCCTAC TTCGAGCGCT GGCCCCAGGT CTCGCAGGCG
GAGTACCTGG CTCCCCTGGG CTACGAGGCC GTCTACCGCA CCAATGCCTA CACGCGCCAT
GGCGAGCACG GCAACGCGCT GCTCACTCGC TGGCCCGTGG TGGGCCACCA GCACGAAGAC
ATCTCCGACC ACCGCTTCGA GCAGCGGGGC CTGCTGCATG TGGAGGTGGA AGTGCAGAAC
CGGCGCGTGC ACACCATCGT GGTGCACCTG GGCCTGATCC CCGGCAGCCG CGTGCGCCAG
GTCTCACAGC TCAAGCGCTT CATCGAGCGA GAGGTGCCGC CCGGCGCGCC CGTGGTGGTG
GCTGGCGACT TCAACGACTG GGGTGGCCAG ATCAAGCGCA TGCTTGGCGG TTTCGGCCTG
TACGAATACG ACGAATTGCC CAGCGTGCCC ACCTATCCCT CGCGCCTGCC GCTGGCCCAA
CTGGACCATG TCTACGTGCG CGGCCTCACC CCGCTGGGCC TGCATGTGCC CAAGGGCCGC
ATCTGGTGGC GCATGTCCGA CCATCTGCCG CTGATTGCCG AATTCCGCCT CTAG
 
Protein sequence
MTDNVKSSHE VDPGPSILRV ATYNIHKGVQ GMGPVRRLEI HNLGHAVEQL DADIVCLQEV 
RKMNHKEAAY FERWPQVSQA EYLAPLGYEA VYRTNAYTRH GEHGNALLTR WPVVGHQHED
ISDHRFEQRG LLHVEVEVQN RRVHTIVVHL GLIPGSRVRQ VSQLKRFIER EVPPGAPVVV
AGDFNDWGGQ IKRMLGGFGL YEYDELPSVP TYPSRLPLAQ LDHVYVRGLT PLGLHVPKGR
IWWRMSDHLP LIAEFRL