| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5441 |
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| Symbol | |
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| ID | 5751059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6039718 |
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| End bp | 6041211 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300572 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001566455 |
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| Protein GI | 160900873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.876365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACC GCCGTTCCCT GCTGGCCAGC TCCGCTGCTG CCGGCCTGCC CCTGCTGATG
CCCTGGCCTG CGCTGGCCCA GAGCCGCAAG GACAGCATCA CGCTGGCGAT GACGCTGGAG
CCCCCGGGGC TGGACCCCAC GGCCGGCGCC GCATCGTCCA TCGGCGAGAT CGTGCTCTAC
AACCTGTTCG AGACGCTGAC CAAGATCAAC CCGGACGGCA GCGTCTCGCC GCTGCTGGCC
GAGAGCTGGG AGGTCTCGCC CGACCTCAAG ACCTACACCT TCCGCCTGCG CAAGGGCGTG
AGTTTTCAGA ACGGCGAGCC CTGCAACGCC CACAGCGTGA AGTATTCCTT CGACCGGGCG
GGCGACGACA AGAGCACCAA CAAGGACAAG CGGACCTTCG CCTCCCTGTC CACGCGCGTG
GTGGACGACC ACACCGTGGT CGTGATCAAC AAGGACATCG ATCCCGACTT CCTCTTCGTG
CTCGGCCAGG CGACGTCCAT CATCGTCGAG CCCAAGAGCG CGGCCACCAA CGCCACGCGC
CCCGTGGGCA CGGGCCCCTA CCAGTTGGGC AACTGGAGCA AGGGCGCCTC GGTCACGCTC
ACGGCCTGGC CGCAGCATCG CATGGCCTCC GGCCTGCGCA TTCGCCGCGC CAGCTTTCGC
TTCATCTCCG ACCCTGCGGC CCAGGTCGCT GCGCTGCTGG CTGGCGACGT CGATGCCTTT
CCGCGCGTGA CGCCGCGCAG CGTGGCCCAG TTCAAGGCCA ACGGGCGCTT CCAGGTCGTG
GTCAGCGGCT CGCGCGCCAA GACCATCCTG GCCATGAACA ACGCACGCAA GCCCCTGGGC
GACGCGCGCG TGCGCCGCGC CATCGCCGCG GCCATCGACC GCAAGGCCGT GATCGACGGC
GCGGGCGACG GCTACGGCCT GCCCATCGGC AGCTACTACG TGCCCACGGC CTTCGGCTAC
GTGGACACCA CGGGCATCAA CCCCTTCGAC GTGGAAAAGG CCAAGGCGCT GCTGGCCGAG
GCCGGCGTCA AGACCCCGCT GGAGCTGACC ATGACCCTGC CGCCCACGCC CTACGCGCGC
CAGGGCGGCG AGGTGATTGC CGCGCAGCTG GCCAAGATCG GCATCCGCGC CAAGCTGCAG
AACGTCGAAT GGGCGCAGTG GCTGTCGGGC ACCTACACCC TCAAGAACTA CGACCTGACG
CTGATCTCCC ATGTCGAGCC CTTCGACCTG GGCAACTTCG CCAAGCCCGA TTACTACTGG
GGCTACCAGT CGTCCCAGTT CAACGAGCTG TACGACAAGA TCAAGAACGC CTCGCGCCCC
GCCGACCGCT CGCGCCTGCT GGGCGATGCC CAGCGCCTGC TGGCCCAGGA TTGCGTGCAC
GCCTTCCTCT ACACGCCGCA ATGGGTCACC GTGGCCAACA AGAACCTGCG CGGACTGTGG
AAGGACATGC CCATCTTCGT CAACGATCTT TCGGCACTGT CCTGGGCCAC CTGA
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| Protein sequence | MFNRRSLLAS SAAAGLPLLM PWPALAQSRK DSITLAMTLE PPGLDPTAGA ASSIGEIVLY
NLFETLTKIN PDGSVSPLLA ESWEVSPDLK TYTFRLRKGV SFQNGEPCNA HSVKYSFDRA
GDDKSTNKDK RTFASLSTRV VDDHTVVVIN KDIDPDFLFV LGQATSIIVE PKSAATNATR
PVGTGPYQLG NWSKGASVTL TAWPQHRMAS GLRIRRASFR FISDPAAQVA ALLAGDVDAF
PRVTPRSVAQ FKANGRFQVV VSGSRAKTIL AMNNARKPLG DARVRRAIAA AIDRKAVIDG
AGDGYGLPIG SYYVPTAFGY VDTTGINPFD VEKAKALLAE AGVKTPLELT MTLPPTPYAR
QGGEVIAAQL AKIGIRAKLQ NVEWAQWLSG TYTLKNYDLT LISHVEPFDL GNFAKPDYYW
GYQSSQFNEL YDKIKNASRP ADRSRLLGDA QRLLAQDCVH AFLYTPQWVT VANKNLRGLW
KDMPIFVNDL SALSWAT
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