Gene Daci_5425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5425 
Symbol 
ID5751042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6023283 
End bp6024716 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content67% 
IMG OID641300555 
Producthypothetical protein 
Protein accessionYP_001566439 
Protein GI160900857 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC GACTGCTTGC CAAAGGCGTG GCCCTGCTGG TCATGCTGGG CCTTTTGATG 
CTGGGCCTGG GCCTGATACA CGACGTGGTG CGGGACCGCA TACGCAACCG CGACAACGCC
GTGCAGGGCG TGGTCGCCAG CCTGGCTGGC CGCCAGACGC TGATGGGCCC GGTGCTGGTG
CAAAACTGCA CCGAGACCAC GGGCGTGGAA AAAGGCAGCA AGACCGAATG GACCACGCGC
CAGTTCCAGC GCATGCTGCT GCCCGACCAA CTGCGCCACC AGGCCACGGC GCGCATGGAG
GAGCGCTCGC GCGGCCTGCA CCAGGTCAGC ACCTATGCCA TGCAGGACAG CATCAGCGCC
AGCTTCACGA ACGCCGCCCA GTACCTGGAA AAGCCCTCCA TCGACACGGC GGCCAACCAG
ACCGTGCGCT GCGGCGCACT GCGGGTGGCG CTGTCGCTCA CCGATCCGCG CGGCATACGC
TCGGCCACCA TCGAAGCCGA TGGCAAGAGC CTGGACGTGG GCCCCGGCAC ATCACTGGAG
CGCTACTCGC AGGGCCTGCA GGCGGAACTG GCGCCGGCCC TGCTCAAGAA GGACGGGCCC
CTTGAACTGA AGATTGCCCT GGAACTGGTG GGCACCGAAA AGCTGGCCTT CGTGCCGCTG
GGCAGCCACA GCCAGGTCCA GTTGTCGGCC GACTGGCCCC ATCCCTCGTT CGGTGGCAGC
TTTCTGCCCA ACCGGCGGGA GATCAGCGAC AAGGGCTTCG AAGCCAGCTG GAACCTCTCG
GCCCTGGCTT CATCCGCACG CCAGTCCTTC ACTGACCAGC AGCCGCTGTG CCAGCCTGGC
CGCCGCGACA TGGAGGAATA CGCGGCCACC GCCCATGCCC CCAACAGCGG CCCTTGCCTG
GAATCGCTGG ATACGGACTT CGTGGACCCC ATCAACGCCT ACTCGTTGAG CGACCGCGCC
ACCAAGTACG GCCTGCTCTT CGTGGTACTG ACCTTCGTGG CCGTCGGCCT GTTCGAGGTG
CTCAAGCAGC TGCGCGTGCA TCCCATCCAG TACCTGCTGG TGGGATCGGC GCTGTGCAGC
TTCTTCCTGC TGCTGATCAG CCTGTCGGAG CACATGGGAT TTGCCAGCGC CTACGGCATT
GCCGCCTCGG CCTGCGTGCT GCTGCTGGCC TACTACGCCA GCCACATCCT GGGCAGCCTG
CGCCGCGGCC TGCCGTTTGC GGCGGGCATC GCCGCACTCT ACGGCCTGCT GTACGTGCTG
CTGCAACTGG AGCAAAGCGC GCTCATCGTG GGATCGATCG CGCTGTTCGC GGTGCTGGCC
CTGATCATGG TCTGCACGCG GCATGTGGAC TGGTATGCCT TCGGCCGGCA GGATGGCGAC
CGCTCCAGTG AAGGCGCGGG CACCCCACCC ACCGTGGGAG CGCTGCAGCC ATGA
 
Protein sequence
MKNRLLAKGV ALLVMLGLLM LGLGLIHDVV RDRIRNRDNA VQGVVASLAG RQTLMGPVLV 
QNCTETTGVE KGSKTEWTTR QFQRMLLPDQ LRHQATARME ERSRGLHQVS TYAMQDSISA
SFTNAAQYLE KPSIDTAANQ TVRCGALRVA LSLTDPRGIR SATIEADGKS LDVGPGTSLE
RYSQGLQAEL APALLKKDGP LELKIALELV GTEKLAFVPL GSHSQVQLSA DWPHPSFGGS
FLPNRREISD KGFEASWNLS ALASSARQSF TDQQPLCQPG RRDMEEYAAT AHAPNSGPCL
ESLDTDFVDP INAYSLSDRA TKYGLLFVVL TFVAVGLFEV LKQLRVHPIQ YLLVGSALCS
FFLLLISLSE HMGFASAYGI AASACVLLLA YYASHILGSL RRGLPFAAGI AALYGLLYVL
LQLEQSALIV GSIALFAVLA LIMVCTRHVD WYAFGRQDGD RSSEGAGTPP TVGALQP