Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5425 |
Symbol | |
ID | 5751042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6023283 |
End bp | 6024716 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300555 |
Product | hypothetical protein |
Protein accession | YP_001566439 |
Protein GI | 160900857 |
COG category | [V] Defense mechanisms |
COG ID | [COG4452] Inner membrane protein involved in colicin E2 resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACC GACTGCTTGC CAAAGGCGTG GCCCTGCTGG TCATGCTGGG CCTTTTGATG CTGGGCCTGG GCCTGATACA CGACGTGGTG CGGGACCGCA TACGCAACCG CGACAACGCC GTGCAGGGCG TGGTCGCCAG CCTGGCTGGC CGCCAGACGC TGATGGGCCC GGTGCTGGTG CAAAACTGCA CCGAGACCAC GGGCGTGGAA AAAGGCAGCA AGACCGAATG GACCACGCGC CAGTTCCAGC GCATGCTGCT GCCCGACCAA CTGCGCCACC AGGCCACGGC GCGCATGGAG GAGCGCTCGC GCGGCCTGCA CCAGGTCAGC ACCTATGCCA TGCAGGACAG CATCAGCGCC AGCTTCACGA ACGCCGCCCA GTACCTGGAA AAGCCCTCCA TCGACACGGC GGCCAACCAG ACCGTGCGCT GCGGCGCACT GCGGGTGGCG CTGTCGCTCA CCGATCCGCG CGGCATACGC TCGGCCACCA TCGAAGCCGA TGGCAAGAGC CTGGACGTGG GCCCCGGCAC ATCACTGGAG CGCTACTCGC AGGGCCTGCA GGCGGAACTG GCGCCGGCCC TGCTCAAGAA GGACGGGCCC CTTGAACTGA AGATTGCCCT GGAACTGGTG GGCACCGAAA AGCTGGCCTT CGTGCCGCTG GGCAGCCACA GCCAGGTCCA GTTGTCGGCC GACTGGCCCC ATCCCTCGTT CGGTGGCAGC TTTCTGCCCA ACCGGCGGGA GATCAGCGAC AAGGGCTTCG AAGCCAGCTG GAACCTCTCG GCCCTGGCTT CATCCGCACG CCAGTCCTTC ACTGACCAGC AGCCGCTGTG CCAGCCTGGC CGCCGCGACA TGGAGGAATA CGCGGCCACC GCCCATGCCC CCAACAGCGG CCCTTGCCTG GAATCGCTGG ATACGGACTT CGTGGACCCC ATCAACGCCT ACTCGTTGAG CGACCGCGCC ACCAAGTACG GCCTGCTCTT CGTGGTACTG ACCTTCGTGG CCGTCGGCCT GTTCGAGGTG CTCAAGCAGC TGCGCGTGCA TCCCATCCAG TACCTGCTGG TGGGATCGGC GCTGTGCAGC TTCTTCCTGC TGCTGATCAG CCTGTCGGAG CACATGGGAT TTGCCAGCGC CTACGGCATT GCCGCCTCGG CCTGCGTGCT GCTGCTGGCC TACTACGCCA GCCACATCCT GGGCAGCCTG CGCCGCGGCC TGCCGTTTGC GGCGGGCATC GCCGCACTCT ACGGCCTGCT GTACGTGCTG CTGCAACTGG AGCAAAGCGC GCTCATCGTG GGATCGATCG CGCTGTTCGC GGTGCTGGCC CTGATCATGG TCTGCACGCG GCATGTGGAC TGGTATGCCT TCGGCCGGCA GGATGGCGAC CGCTCCAGTG AAGGCGCGGG CACCCCACCC ACCGTGGGAG CGCTGCAGCC ATGA
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Protein sequence | MKNRLLAKGV ALLVMLGLLM LGLGLIHDVV RDRIRNRDNA VQGVVASLAG RQTLMGPVLV QNCTETTGVE KGSKTEWTTR QFQRMLLPDQ LRHQATARME ERSRGLHQVS TYAMQDSISA SFTNAAQYLE KPSIDTAANQ TVRCGALRVA LSLTDPRGIR SATIEADGKS LDVGPGTSLE RYSQGLQAEL APALLKKDGP LELKIALELV GTEKLAFVPL GSHSQVQLSA DWPHPSFGGS FLPNRREISD KGFEASWNLS ALASSARQSF TDQQPLCQPG RRDMEEYAAT AHAPNSGPCL ESLDTDFVDP INAYSLSDRA TKYGLLFVVL TFVAVGLFEV LKQLRVHPIQ YLLVGSALCS FFLLLISLSE HMGFASAYGI AASACVLLLA YYASHILGSL RRGLPFAAGI AALYGLLYVL LQLEQSALIV GSIALFAVLA LIMVCTRHVD WYAFGRQDGD RSSEGAGTPP TVGALQP
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