| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5418 |
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| Symbol | |
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| ID | 5751033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6013485 |
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| End bp | 6015854 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641300546 |
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| Product | histidine kinase |
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| Protein accession | YP_001566432 |
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| Protein GI | 160900850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCACCC AGCCGCCCCC GCCTGACAGC CCCGCCACGC CGGCGCAGCC AGCGCCTGGG
CGTGGCCGTG GACTGCGGCG GGACTGGCTG CTGCTGGCGG CGGGCCTGCT GTCCCTGGTG
TTCTGGCTCA GCGGCGACGG GCAACTCGAC CGCATCAACG GCTTCGTCCA GGACACGGCC
AGCTGGCTGC ACCGCCCCAA GGCATCGCAG GACATCGTCA TCGTCGCCAT CGACGATGCC
AGCATCGACG CCATTGGCCG CTGGCCCTGG CGCCGCGCCC TGCACGCCGG CCTGCTGGAG
CGCATCAGCC AGGCACCGCC GCGCGCCATA GGCCTGGACG TGATGCTCAG CGAGGAAGAC
CTGGACTACC CCGGCGACGA CCTGCTGCTG GCGCGCGTTC TGCAGCGCAG CGGCCGCACC
GTCTTGCCCG TGGCGCCAGG CAGTGGTCCG CTGCCGGCCT TCGCACAGGC CGCAGCGGCG
CTGGGCCATA CCCAGCTGCC CGTGGACGCC GATGGCGCGG TGCGCGGCTT CCATGCCATA
GAAGGCAGTG CGCAGCAGCC CTGGTGGCAC ATGGCGCTGG CCCTGCACTG CGTGGGCGAG
AACGGCCGCG CATGCGCCCG CCCGGAGCCC GTGCCGCCCA TGGACCCCGA CGCACTCTCC
TGGCAACGCC GCCAGCAGGA GATCATTGCC TTTGCACAGG CCAGGCCGGA GCAAGGCGCC
AGGGACCGCT CGCCCTTCAC CACCTATTCC TACATCGACG TGCTGCGCGG CCGCATTCCT
GCAGCGGCAT TCCGCGGCAA ATACGTGCTC ATCGGCACGA CGGCCACCGG CCTGGGCAGC
CGCTTCACCG CACCGCTGGG CACCAGCGCG CGGCCCATCT CCAGCGTGGA GATGCTGGCC
CATGTGCTCA ACGGCAGCCT GCAGGGCTCG CATGTGCATC CCGCGTCGGC CACGCTCAAC
CGCGCGCTCA ATGCGGCAGC CGTGCTGCTG GCCCTGCTGG CCCTGGCCTG GCTGGGCCCG
TCGGGCGGCA TGCTGGCCTG CGCGCTGCTG GCCCTGGCCT GCCTCTCTCT GGCCGGGCTT
GCACCGCGCC TGTGGCAGGT GCAGACGGCG CCTGCAGCCG GCCTGCTGGG CCTGGCCCTG
GCCTATCCGC TATGGAGCTG GCTGCGCCTG CGCGCCGCCG CGCGCTTTCT GGCGCTGGAG
CTGCGCGACC TGCAGGGGCA GGGCCTGCCC ACCGCGCTGC GCCTGGGCGG CGACCTGCTG
GATCAGCGCA TCGCGGCCGT GGAGCAGGCT TCGCGCCAAC TGCGCGCCCT GCACCATTTC
GTCAGCGAAA GCCTGCGCCA GCTGCCCTCG CCGACCTTTG TCTGCGACCG GCAGGGCCAT
GTGCTGCTGG CCAATGCCGC AGCCCACGCC TATGCGCGCA GCCTGGGGCA TGACCTCAGG
GCCGGCGATG CCCTGCCCCG GCTGCTCGAT GGTCTGCGGG CACTGGACAC GGCAGCCGGC
GCGTCCGCCG GCCAGCCCTT GCTCACGCCC GAGGCACTTG CCGCCCACGG CCTGCCGCCC
AGCAGCGAGG GGCGCGACCC CATGGGACGC AGCCTGATGC TGCTGACCCA GACCTTCGAG
GCACCGCCGA CCACGGGCTG GCTGATTACC CTGGTCGATA TCAGCGATCT GCGCAGCGCC
CAGGCCCAGC GCGACCTGGC CATGCAGTTC ATCTCGCACG ACATCCGTGC GCCCGTGGCA
TCCATCATCA CCTTGCTGGA GATGCAGCGC GGCGCCGTAC AGGCGCCCGA CCTCGGCCTC
CTGCTGCCGC GCATCGAAGG CTATGCCCAG GCCTCCCTGC AGCTGGCCGA CGATTTCGTG
CACCTGGCAC GCGCCCAGCA GCAGGCGCTG CGCCGGGAAC GGCTGGACCT GGGCCTGGTG
CTGGACCAGG CCGTGGAAAG CTGCTGGGCC CAGGCCTCTG CGGCCCACGT GCAGCTGGAG
TTCCACCTGC CCGAACAGGA ATGCCCCGTG CTGGGCGATG CGGGCATGCT CCACCGCGCG
GCCGTCAACC TGATCGGCAA CGCCATCAAG TACGGAGCGC GCGCAGATCA GGCAAACCCC
GCCACGGTGC AATGCCTGCT GCGGCAGGAC GCAGGCCATT GCCGCATCAC CATCCGGGAC
CACGGGCCCG GCATGGATGG GCAGGCCGTC GCCCGGCTGA GCCAGCCGTT CGAGCGCCTG
GACCATCACC AGCACCTCGA CGGCGTGGGC CTGGGCCTGG CCTTCGTGCG CACCGTGGCC
GCCCGACATG GCGGGCGGCT TGAGATAGAA AGCACGCCCG GCCAGGGCAG CGCCTTCAGC
ATCGTGCTGC CGAAAGCGGA ACAGGCCTGA
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| Protein sequence | MSTQPPPPDS PATPAQPAPG RGRGLRRDWL LLAAGLLSLV FWLSGDGQLD RINGFVQDTA
SWLHRPKASQ DIVIVAIDDA SIDAIGRWPW RRALHAGLLE RISQAPPRAI GLDVMLSEED
LDYPGDDLLL ARVLQRSGRT VLPVAPGSGP LPAFAQAAAA LGHTQLPVDA DGAVRGFHAI
EGSAQQPWWH MALALHCVGE NGRACARPEP VPPMDPDALS WQRRQQEIIA FAQARPEQGA
RDRSPFTTYS YIDVLRGRIP AAAFRGKYVL IGTTATGLGS RFTAPLGTSA RPISSVEMLA
HVLNGSLQGS HVHPASATLN RALNAAAVLL ALLALAWLGP SGGMLACALL ALACLSLAGL
APRLWQVQTA PAAGLLGLAL AYPLWSWLRL RAAARFLALE LRDLQGQGLP TALRLGGDLL
DQRIAAVEQA SRQLRALHHF VSESLRQLPS PTFVCDRQGH VLLANAAAHA YARSLGHDLR
AGDALPRLLD GLRALDTAAG ASAGQPLLTP EALAAHGLPP SSEGRDPMGR SLMLLTQTFE
APPTTGWLIT LVDISDLRSA QAQRDLAMQF ISHDIRAPVA SIITLLEMQR GAVQAPDLGL
LLPRIEGYAQ ASLQLADDFV HLARAQQQAL RRERLDLGLV LDQAVESCWA QASAAHVQLE
FHLPEQECPV LGDAGMLHRA AVNLIGNAIK YGARADQANP ATVQCLLRQD AGHCRITIRD
HGPGMDGQAV ARLSQPFERL DHHQHLDGVG LGLAFVRTVA ARHGGRLEIE STPGQGSAFS
IVLPKAEQA
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