| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5417 |
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| Symbol | |
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| ID | 5751032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6011682 |
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| End bp | 6013457 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641300545 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001566431 |
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| Protein GI | 160900849 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG CCCTGGGCAG GCCCGTATCG CGGGCCTGCA TGCTGGCCGC TCTCGGCCTG
CTGGGCCTGG GCGGCGCGCA GGCCCAGATC AAACCCGCGG GCCGCAACGG CGACACGATG
GCACACCGGG TCGTCGCCGG CGACACGCTG GAGCAGCTGG CGGCCCGCTA CCTGGGCGAT
GCCCGCCAGT GGACCGACCT GCAGCAGCAC AACGGCGTGG CCAACCCCTA CCGCCTGCGG
CCCGGCTCCG TGCTGGAGAT CCCCGTGCGC CTGCTGCGCG CCGCCGTGGC CTCCGTGGAA
TTCGTGCAGG GCGATGCGCG CAGCACGCGC CCGCTGGACC ACCTGGCCGA TACGCAGGGC
GCGGCCGGAG ACGATGCGGG CCAGCCCCTG CGCAAGGGAC AGACGCTGCA GGAAGGCGAG
CGCCTGCAGC TGGCCCCGGA CGCATTCGTC GCCGTGCGCT TGGCCGATGG CTCCCTGGTG
CGCGTGCAGT CGCAGTCCGA TGTGGTGCTG CGCCAGATGC GCCGCAAGGG CCGTGCCGGC
AGCCTGCAGT CCGTGCTGGA CCTGCGCGAG GGCGGCGTCG AGGCCTCCGT GCCGCCCGAG
CCCGGCAACG CACAGCGCCG CTTCGAGATC CGCACGCCCG CTGCATCGAC CAGCGTGCGC
GGCACCCGCT TCCTGGTCCA GGCTGATGCC GCCGGCAGCA CGGCAGCCGC CGTCGATGAA
GGCACCGTCG CCGTGGGCTC CGACGCCTCA AGCGCGAACA CTGGCGATGC GCTGCTGAGC
CCGGGCCAGG GCGTGGCCGT GGCCGCCAAT GGCCGCGTGG GCGAGCCCCG CCCCATGCTG
GGTGCGCCCG ACATCACGGC GTGGCCCGCG CTGGCGGAAG ACGCCAACTG GATCAGCCTG
CCCCTGCCCG GCTTGCCGGG CGCCGTGCGT TACCAGCTAC AGCTGTCGCG CGATGCCGAC
ATGACCCAGG TGCTGCGCAG CGCCAGCTTC CAGGCCACGG CATCGCCGCT GCGCCTGGCG
GGCGTGGAGG ACGGTGATTA CGTGCTGTCC CTGCGCGGCA TCGATGCCCA GGGCATTCCG
GGCGCCGCCA GCCGCCGCGC CCTGCGCGTC AAGGCCCATC CCGTGCCGCC GCTGTATGAA
TCCCCCCAGG CCGACGCCAC CGTGGGCCTG GGCCGTGCCA GCCTGCAATG CACCCAGGTC
GTGGGCGCCG CGCGCTACCG CATCCAGGTC GTCTCTGCCG ATGCGCAGGC CGGCTTTGCC
GAGCCCGCCA TCGATGCACG CGACCTGAAC GACTGCACAC TGCCCGCCAC CACGCTGGCC
CGCCTGCCGG CCGGACGCTA TCTCTGGCGT GCCGCCAGCA TTCGCACGCT GGCCGATGGA
CAGCCCGACC AGGGCCCGTT TGCCGCAGCC CAGGCCATGC GACTGGCGGC CGTTCCTCCC
CAGCCCTCGG CCAGCGCGCT GCAGATGGGC GGCGGCCCCG CAGAAGGCAG CCGCCAGATC
CGCTGGAGCG GCGAGCCCGG CCAGCGCTAC CACGTGATGG TGGCGCGCGA CCAGGAGTTC
ACCGCGCCGC TGGTGGACCT CTGGACCGAC CAGCCGCAAT GGAGCACCGA GGAGTTGCCC
GCAGGCAGCT ACTACCTGCG CCTGCAGATC GAGGATGCCA ACGGCCTGCG CAGCGATTTC
TCGGCCGCGC GCCAGTTCCG CACCGGCAGC TGGATCGTCG ACGCCAGCGG CGAGATGATG
CATTCGGGCA ACGGAGAGCG CCTGCAGCGC CAGTAG
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| Protein sequence | MPAALGRPVS RACMLAALGL LGLGGAQAQI KPAGRNGDTM AHRVVAGDTL EQLAARYLGD
ARQWTDLQQH NGVANPYRLR PGSVLEIPVR LLRAAVASVE FVQGDARSTR PLDHLADTQG
AAGDDAGQPL RKGQTLQEGE RLQLAPDAFV AVRLADGSLV RVQSQSDVVL RQMRRKGRAG
SLQSVLDLRE GGVEASVPPE PGNAQRRFEI RTPAASTSVR GTRFLVQADA AGSTAAAVDE
GTVAVGSDAS SANTGDALLS PGQGVAVAAN GRVGEPRPML GAPDITAWPA LAEDANWISL
PLPGLPGAVR YQLQLSRDAD MTQVLRSASF QATASPLRLA GVEDGDYVLS LRGIDAQGIP
GAASRRALRV KAHPVPPLYE SPQADATVGL GRASLQCTQV VGAARYRIQV VSADAQAGFA
EPAIDARDLN DCTLPATTLA RLPAGRYLWR AASIRTLADG QPDQGPFAAA QAMRLAAVPP
QPSASALQMG GGPAEGSRQI RWSGEPGQRY HVMVARDQEF TAPLVDLWTD QPQWSTEELP
AGSYYLRLQI EDANGLRSDF SAARQFRTGS WIVDASGEMM HSGNGERLQR Q
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