Gene Daci_5405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5405 
Symbol 
ID5751020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5999053 
End bp6000051 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID641300533 
Producthypothetical protein 
Protein accessionYP_001566419 
Protein GI160900837 
COG category[S] Function unknown 
COG ID[COG4255] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.562328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTGA CCGCGCCCCT GGTGTCCTCC ACCCAAGCCC CGCTGGAGGA AACGACCGAA 
TGGATCATCC CCTATGCCGG CGGTCCGTCC TCGGATGCAG CGGATGACGC TGCCGTCACG
GCCGTCTGGG GCGGACTGGA GCTGCCCCAT CTCCAATCCC TGCTGGCGCT GATGCAGCCC
GCGCCCGCAC AGACCGGCAC GGAGATGGAT TTTTCTCCCC CCCACGAACG CGCCCTGGCG
CGCTCGCTGG GCCTGCCCGA TGCGCCGGGC CTGATTGCCT GGGCCGCCTG GCAGGCCGGT
GAGACGGCGC AGGCCTGCGC CTATGTCACG CCCTGCCACT GGCACATAGG CGCAGACCAG
GTCCACCAGA GCGATCCCGC CACCACACCC CTCAGCGATG AGGAATCCCG CCAGCTGCTG
GCCCTGCTGG CGCCCTGGTT CGCCGACGAC GGCATCGTGC TGGAGTACCA GCAGCCGCAG
CGCTGGCTGG CGCGCGGTGC GCTGTTCGAT GACCTGGCCA CGGCCTCCAT GGACCGCGTC
ATCGGCCGCG ACGTGCGGCC CTGGCTGCCC GATGCGCAGC AGGCGCGCGC CCTGCACCGC
CTGCAAAGCG AGGTGCAGAT GCTGCTCTAC ACCCATGTCT TCAACGATGC CCGCGCCGCG
CGCGGACAGG TGCCGATCAA CGCCTTCTGG GTCCACGGCG CCGGGCGCCT GCAGCCCGGC
ACGGCCACCG GCGCCAAGGC CGCCGTGCAA TGCCTGGACG ACCTTCACGC CGCAGCCCTG
CAGGGCAACC CCGCTGCGTG GCGCGAGGCC TGGAAGGCGC TGGACGCCGG ACTCATCGCC
CGCCTGCTGG AGCGCGTGCG CGCAGGCCAC CCGCTCACGC TGACGCTGTG CGGCGAACGC
CATGCCATCG CATGGAGCAG CCGCCCGCCG CGCTGGCTGG ACAGGCTGAC GGGCCTTTTC
GGCCCCCGCG CCCTGCCCGA CCTGGGCCGC ATGCTCTGA
 
Protein sequence
MLLTAPLVSS TQAPLEETTE WIIPYAGGPS SDAADDAAVT AVWGGLELPH LQSLLALMQP 
APAQTGTEMD FSPPHERALA RSLGLPDAPG LIAWAAWQAG ETAQACAYVT PCHWHIGADQ
VHQSDPATTP LSDEESRQLL ALLAPWFADD GIVLEYQQPQ RWLARGALFD DLATASMDRV
IGRDVRPWLP DAQQARALHR LQSEVQMLLY THVFNDARAA RGQVPINAFW VHGAGRLQPG
TATGAKAAVQ CLDDLHAAAL QGNPAAWREA WKALDAGLIA RLLERVRAGH PLTLTLCGER
HAIAWSSRPP RWLDRLTGLF GPRALPDLGR ML