Gene Daci_5403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5403 
Symbol 
ID5751018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5996594 
End bp5997616 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID641300531 
Producthypothetical protein 
Protein accessionYP_001566417 
Protein GI160900835 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.757696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.848586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCC TGTTCCAAGC CACCCATGCC ACCCATGCCT TGCGCAGCCC GCTGCTGCGG 
GCCGGCCTGG CCCTTTTGCT GGGCCTGGGC TCCGGCGCTG GCGCCCGGGC CGATGCGGCC
GCCGATGCTG CCGCCTGGCC CGCCAAACCC GTGCGCATCG TCGTCGCCTT CGCGCCCGCC
GGCGCCGCCG ACATCCTGGC GCGCAGCCTG GGCGAGGTGC TGCAGCGTGA ACTCAAACAG
CCCTTCGTCG TGGACAACCG GCCCGGCGCG GGCGGCAACA TCGGCACCGA CAACGCGGCC
AAGGCGCCCG GCGACGGCTA CACGCTGCTG GTCGGCATCG ACACGACCTT CACCGTCAAT
CCCTTCATCT ACAAGAGCAT GCCGTTCAAG GGCACGGACC TGCGCCCCGT GATGATGATC
GCCTCGCAGG GAATGATGGT GGCCGTCAAC CCGCGCACCG GCCTCAGGAC GCTGGACCAG
TTCATCGCCC AGGGCAAGAG AAGCGGCCTG ACGCTGGGCT CGGCCGGCTA CGGCACGCCG
GGCCACCTGG CCTCGGCCAT CCTGACCCAT GCCACGGGCG CCAAGGTCAG CCACGTGCCC
TACAAGGGCA ACGCCCCGGC CAGCACGGCC GTGCTGGCGG GCGAGGTGGA CGGCGGCATC
ATCAGCTCCT CGGCCATGCT GGGCCAGGTG GCGGCCGGCA AGGTCGTGCC GCTGGCCGTG
ACCACGCGCC AGCGCAACCC GCTGGTGCCC GGCGTGCCCA CCGTGGGCGA GCTGGGCCAC
AAGGACCTGG AGCAGGAAGT GCTGTTCGCC CTGTGGGTGC CTGCCGCCAC GCCCGAGCCC
CTGGTCGCAA GAATCCAGTC CGCGCTGGAA AAGGCCATGA AGGATCCGGC CCTGCGCGAG
CGCATGCGCG CCAACGACCT GTTCTACGAA GGCCTGACCG GCCCGGCCGC CGCCGAACGC
ATACAGGCGC TGGCCGACCG CTACCGGACC GTGATCCAGT CCACCGGAAT GAAGATGGAA
TGA
 
Protein sequence
MFSLFQATHA THALRSPLLR AGLALLLGLG SGAGARADAA ADAAAWPAKP VRIVVAFAPA 
GAADILARSL GEVLQRELKQ PFVVDNRPGA GGNIGTDNAA KAPGDGYTLL VGIDTTFTVN
PFIYKSMPFK GTDLRPVMMI ASQGMMVAVN PRTGLRTLDQ FIAQGKRSGL TLGSAGYGTP
GHLASAILTH ATGAKVSHVP YKGNAPASTA VLAGEVDGGI ISSSAMLGQV AAGKVVPLAV
TTRQRNPLVP GVPTVGELGH KDLEQEVLFA LWVPAATPEP LVARIQSALE KAMKDPALRE
RMRANDLFYE GLTGPAAAER IQALADRYRT VIQSTGMKME