Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5402 |
Symbol | |
ID | 5751017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5995944 |
End bp | 5996450 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641300530 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001566416 |
Protein GI | 160900834 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.153615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.942445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATACCC GTCCCGCTCC CACCTCCATC CAGCAGATGC TGCTGTTTCG CATCAACCGC TACTTCGGTG CAGCGGGCGG CGTGGCCATG CGCATGTGCG AGGCGCATTT CGGCATCACG CGCCGCGAGT GGGGCGTGAT GGCCACGGTG GCTGCCAATG AGGGCCTGCT GTCGTCGGAG CTGGCCGAAC GCGCGCAGCT GGACCGCGCA CGCACCTCGC GCGCCCTCAG CGGGCTGGAG GAAAAGGGCT GGGTGCAGCG CAGCCCCATG CCCGGCGACC GCCGCCGCGT GGCCGTGTCG CTGACCGCCG AGGGGCGGCG CATGTATGGC CTGATCCTGC CGCGCATGGC CCAGATCCAC CTGGACCTGG TGTCCGTGCT CAGCGACGAG GAACTCGCAC AATTCGATAC CTTGCTGGCC AGGCTGCAGC GCCATGCGTT GACGCTGGAG GCGGAGGGCC GCTACGACGC CCTGCCGCGT GTGGACCGCG GACGGCACCG GCGCTGA
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Protein sequence | MNTRPAPTSI QQMLLFRINR YFGAAGGVAM RMCEAHFGIT RREWGVMATV AANEGLLSSE LAERAQLDRA RTSRALSGLE EKGWVQRSPM PGDRRRVAVS LTAEGRRMYG LILPRMAQIH LDLVSVLSDE ELAQFDTLLA RLQRHALTLE AEGRYDALPR VDRGRHRR
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