Gene Daci_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5402 
Symbol 
ID5751017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5995944 
End bp5996450 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content70% 
IMG OID641300530 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001566416 
Protein GI160900834 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.153615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.942445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACCC GTCCCGCTCC CACCTCCATC CAGCAGATGC TGCTGTTTCG CATCAACCGC 
TACTTCGGTG CAGCGGGCGG CGTGGCCATG CGCATGTGCG AGGCGCATTT CGGCATCACG
CGCCGCGAGT GGGGCGTGAT GGCCACGGTG GCTGCCAATG AGGGCCTGCT GTCGTCGGAG
CTGGCCGAAC GCGCGCAGCT GGACCGCGCA CGCACCTCGC GCGCCCTCAG CGGGCTGGAG
GAAAAGGGCT GGGTGCAGCG CAGCCCCATG CCCGGCGACC GCCGCCGCGT GGCCGTGTCG
CTGACCGCCG AGGGGCGGCG CATGTATGGC CTGATCCTGC CGCGCATGGC CCAGATCCAC
CTGGACCTGG TGTCCGTGCT CAGCGACGAG GAACTCGCAC AATTCGATAC CTTGCTGGCC
AGGCTGCAGC GCCATGCGTT GACGCTGGAG GCGGAGGGCC GCTACGACGC CCTGCCGCGT
GTGGACCGCG GACGGCACCG GCGCTGA
 
Protein sequence
MNTRPAPTSI QQMLLFRINR YFGAAGGVAM RMCEAHFGIT RREWGVMATV AANEGLLSSE 
LAERAQLDRA RTSRALSGLE EKGWVQRSPM PGDRRRVAVS LTAEGRRMYG LILPRMAQIH
LDLVSVLSDE ELAQFDTLLA RLQRHALTLE AEGRYDALPR VDRGRHRR