Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5399 |
Symbol | |
ID | 5751014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5992432 |
End bp | 5993898 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300527 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_001566413 |
Protein GI | 160900831 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.110775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.536808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCT CAGCATGGAG TCGGATCCTG GACCTGGGTG GCGCAGGCCG CCAGGCGGAA CTGGATGGGC AGTTGGCCGC CATCCACAAG TCCCAGGCCG TGATCGAGTT CGATCTGCAA GGTCATGTGC TGGCCGCCAA CCAGAACTTC CTGGACACCA TGGGCTATGA GGAAGGCGAG GTCATCGGCC AGCACCATCG CATGTTCGTG GACCACCAGA TGAGCGAGTC GCCCGAGTAC GCGGCGTTCT GGCAGCGCCT GGGCAATGGC ATCCACGACG CGGGACGCTA CCGCCGCATT GCCAAGGACG GGCGCGATGT CTGGCTGCAG GCCAGCTACA ACCCCATCTT CGATCGCCAT GGCAGGCCCT TCAAGGTGGT GAAGTACGCC ACCGACATCA CCGAGCAGCA GCGCCGCAAC GCCGACGCCG AAGGCCAGCT GGCCGCCATC TCCAAGGTGC AGGCCATCAT CGAGTTCGAC CTGCAGGGCA ACATCCTGCA TGCCAACCGC CTGTTCCTGC AGGCCATGGG CTACACGCTG GACGAGGTCG TCGGACGGCA CCACAGCATG TTCGTCCAGC CCCATGAACG CCACAGCCCC GAATATGCGC AGTTCTGGCG CAAGCTGGCC AGCGGCCAGC ACGATGCGGG CCAGTACCTG CGCATCGGCA AGCACGGCCG CCAGGTCTGG ATCGAGGCCA GCTACAACCC CATCCTCGAT GCCGATGGCC GGCCGTTCAA GGTGGTCAAG TACGCCCGCG ATATCACGCG CCGCTTCACG GCCGCGCAGA CCCTGGGCGA GGCCATGCAG GGCCTGAGCG AAAGCGCCGA GCACGCAGGC CAGGCCAACG AACTGGCCCG CCAGGCCTGC CTGGTGGCCG AGCAGGGCGG GCGCACGGTG CACGAGGTCA TGGGCACCAT GGAGTCCATC AGCGCCAGCT CGCGCAAGAT CAGCGACATC ATCGGCGTGA TGGACGGCAT CGCCTTCCAG ACCAATATCC TCGCGCTCAA CGCTGCCGTG GAGGCGGCCC GCGCAGGCGA GCAGGGCCGG GGCTTTGCCG TGGTGGCGGG CGAGGTACGG GCACTGGCAC AGAACAGCGC CGCCGCCGCC AAGGAAATCA AGCAGCTCAT CCACACCTCG GTGGAGCAGG TGGCACTGGG CGCCAATCAG GTGCGCCAGG CCGGGGGCAC CATGCAGGAG ATCGTGGACT CCTCGCACCA GGTCACGGCC ATCATGGGCG ATGTGGTGCA GGCGTCCATG GCCCAGTCGG CACGCCTGCG CGAGGTGACA GCCGACCTGA CGGCGCAGAG CGCGGCCGTC GCGGATGCAT CCAGGGAACA GGTGCAGCGC AAGCCGCTGC CGGCATCCAT CGTTCCCGCT GCGCCGCAGA TCAAGTCGGC CCCGGCAGCG GCCGTGCTTC CCGCAGGCGC CCAGCGCCTG CCGGGCACCT TGCTGCGCAT GGCCTGA
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Protein sequence | MKRSAWSRIL DLGGAGRQAE LDGQLAAIHK SQAVIEFDLQ GHVLAANQNF LDTMGYEEGE VIGQHHRMFV DHQMSESPEY AAFWQRLGNG IHDAGRYRRI AKDGRDVWLQ ASYNPIFDRH GRPFKVVKYA TDITEQQRRN ADAEGQLAAI SKVQAIIEFD LQGNILHANR LFLQAMGYTL DEVVGRHHSM FVQPHERHSP EYAQFWRKLA SGQHDAGQYL RIGKHGRQVW IEASYNPILD ADGRPFKVVK YARDITRRFT AAQTLGEAMQ GLSESAEHAG QANELARQAC LVAEQGGRTV HEVMGTMESI SASSRKISDI IGVMDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR ALAQNSAAAA KEIKQLIHTS VEQVALGANQ VRQAGGTMQE IVDSSHQVTA IMGDVVQASM AQSARLREVT ADLTAQSAAV ADASREQVQR KPLPASIVPA APQIKSAPAA AVLPAGAQRL PGTLLRMA
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