Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5397 |
Symbol | |
ID | 5751012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5990775 |
End bp | 5991320 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641300525 |
Product | hypothetical protein |
Protein accession | YP_001566411 |
Protein GI | 160900829 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.538915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.547582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCA TGTCCTTGAC CGTTCCCGAC CTGCCGCCCC CCGGCGCCCC GCGCTGGCAG GGCCTGGCGC CGGTGGCCGA TGCGCGGACC CGGGCCCTGG TGCTGGGCAG CTTTCCGGGC CTGCGATCGC TGCAATTGCA GCAGTACTAT GCCCATCCGC AAAACCAGTT CTGGCCCTTG CTCCAGGCCC TGTGGCCCGG GCATCCGCAG CCCGGCCGCG ACGACTATGC GGGCCGCTGC GAATGGCTGC TGGCCCGCGG CCTGGGCCTG TGGGACGTGT ATGCCAGCTG CGAGCGCGAA GGCAGCCTGG ACAGCGCCAT CCGCGCGGCC GAGGTGAATG ATTTCGTGGC GCTGCGCACG CATTGCCCCC AACTGGCGCT GGCCCTGCAC AACGGTGGCG AGAGCTACAA GCATGCCGGC CGCACGCAGG CCCTGGGCCT GGCCGCCGTG AAGCTGCCAT CGACCAGCCC GGCCAACGCG AGCTGGAGTT TCGCGCGCAA GGTCCAGGCC TGGCGCGAGG CGCTGGCTGC CCATCAATTG CTCTGA
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Protein sequence | MPAMSLTVPD LPPPGAPRWQ GLAPVADART RALVLGSFPG LRSLQLQQYY AHPQNQFWPL LQALWPGHPQ PGRDDYAGRC EWLLARGLGL WDVYASCERE GSLDSAIRAA EVNDFVALRT HCPQLALALH NGGESYKHAG RTQALGLAAV KLPSTSPANA SWSFARKVQA WREALAAHQL L
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