Gene Daci_5393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5393 
Symbol 
ID5751008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5985822 
End bp5987333 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content63% 
IMG OID641300521 
Producthypothetical protein 
Protein accessionYP_001566407 
Protein GI160900825 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTTT TTCAGAACCT GGCGACCGGC TTCGGCGTCG CCTTCACTTT CCAGAACCTG 
ATCTACTGCT TCGTCGGCTG TCTGCTCGGT ACGCTCATCG GCGTGCTTCC AGGCATCGGC
CCCGTGGCAA CGATCGCCAT GCTGCTGCCA GCAACCTACG CTCTGCCTCC GGTGGCGGCG
CTGATCATGC TGGCCGGTAT CTACTACGGT GCGCAGTACG GTGGCTCGAC CACCGCCATT
TTGGTGAACC TGCCTGGTGA ATCCTCGTCC GTGGTGACCG TGATCGACGG CTACCAGATG
GCAAGAAAGG GGCGAGCGGG ACCCGCTCTC GCTGCCGCAG GCATAGGCTC GTTCTTCGCA
GGTTGCGTGG GCACCGTGAT CCTGGCCGCC TTCGCGCCTC CGCTGACGGA AGTCGCCTTC
AAGTTCGGCC CTGCCGAGTA CTTCTCGCTG ATGACCCTGG GCCTGATCGG CGCCGTGGTG
CTGGCTTCGG GCTCGCTGCT CAAGGCCATT GCCATGATCG TGCTGGGCCT GCTGCTGGGC
ATGGTCGGCA CCGACGTGAA CTCCGGCGTT GCCCGCTACA GCTTCGACAT TCCCGAGCTG
ACCGACGGTA TCGACTTCGT CGTGATCGCC ATGGGTGTGT TCGGCTACGG CGAAATCATT
GCCAACCTGT CCAAGCCCGA GGACGAGCGC GAAGTGTTCG CCGCCAAGGT GACGGGCCTG
ATGCCCACGA AGGAAGACTT CAAGCACATG ATTCCGGCCA TGCTGCGCGG CACGGCCCTG
GGTTCTGCCC TGGGTATCCT GCCCGGTGGC GGTGCCATGC TGTCGGCCTT TGCTGCCTAC
ACGATCGAGA AGAAGACCAA GCTCAAGCCG GGCGAAGTCC CCTTCGGTCA AGGCAACATC
CGCGGCGTGT GCGCTCCCGA GTCGGCCAAC AACGCCGGTT CGCAGACCTC CTTCATCCCG
CTGCTGACGC TGGGCATTCC GCCCAACGCC GTGATGGCGC TGATGGTGGG CGCGATGACC
ATCCACAACA TCCAGCCGGG CCCGCAGGTG ATGACCAGCA ACCCCGAGCT GTTCTGGGGC
CTGATCGCCT CGATGTGGAT CGGCAACCTG ATGCTGATCG TGCTGAACCT GCCGCTGATC
GGCATCTGGA TCAAGCTGCT GACCGTGCCC TACCGCTGGC TGTTCCCGTC CATCGTGCTG
TTCTGCGCGA TCGGCGTGTA CGGTACCAAC AACAACACCT GGGACGTGTG GATGGTGGGT
ATCTTCGGCT TCGTGGGCTA TGTGTTCCAC AAGCTGGGCA CCGAACCGGC TCCCTTGCTG
CTGGGCTTCA TCCTGGGCCC GATGATGGAA GAGAACCTGC GCCGGGCGCT GCTGCTGTCG
CGTGGCGACT GGAGCGTGTT CGTGACCCGT CCGATCTCGG CCGGCCTGCT GCTCGCCGCC
GTGGTGCTGC TGGTGGTAGT GCTGATGCCT GCAGTGAAGA ACAAGCGCGA AGAAGCATTC
GTAGAGGATT GA
 
Protein sequence
MELFQNLATG FGVAFTFQNL IYCFVGCLLG TLIGVLPGIG PVATIAMLLP ATYALPPVAA 
LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTVIDGYQM ARKGRAGPAL AAAGIGSFFA
GCVGTVILAA FAPPLTEVAF KFGPAEYFSL MTLGLIGAVV LASGSLLKAI AMIVLGLLLG
MVGTDVNSGV ARYSFDIPEL TDGIDFVVIA MGVFGYGEII ANLSKPEDER EVFAAKVTGL
MPTKEDFKHM IPAMLRGTAL GSALGILPGG GAMLSAFAAY TIEKKTKLKP GEVPFGQGNI
RGVCAPESAN NAGSQTSFIP LLTLGIPPNA VMALMVGAMT IHNIQPGPQV MTSNPELFWG
LIASMWIGNL MLIVLNLPLI GIWIKLLTVP YRWLFPSIVL FCAIGVYGTN NNTWDVWMVG
IFGFVGYVFH KLGTEPAPLL LGFILGPMME ENLRRALLLS RGDWSVFVTR PISAGLLLAA
VVLLVVVLMP AVKNKREEAF VED