Gene Daci_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5392 
Symbol 
ID5751007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5984353 
End bp5985669 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content68% 
IMG OID641300520 
Producthypothetical protein 
Protein accessionYP_001566406 
Protein GI160900824 
COG category[S] Function unknown 
COG ID[COG4949] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.720822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCAC TACTGTCATC CCAGCACCCG CAGCGCGTGC TGCTGCACAA CGAGATCCAC 
GCCCGCCCCG CCGAGGAGAT GCAGGCGCCG CTGGCCATCA CCCACGTGGT GATGCTCACC
GATGCGGCCC AGCGCGAGGC CAGCCGCGCC CATGTGGCCA CCCTGCTGCG CAACCACCAC
CTACCGCCGC CCGATGCGGC GACCACCCAT GTGCTGATCG ACCTGGGCGC CTTTCACCTG
CGCTGGGAAC TGCACACGGA GTTCGTCTGC TGGACCTTCA GCAAGCCCAT GTCGCAGGCC
GGCATGGACG ATGTGCGCGA GCCCGAGGCC GCCATCGACT ACGTGCCGCG CGACTGGCTG
GCTGCCTTGC CCGGCCAGTG CCTGAGCGGC CTGCACCTGT GGGCCTTGCA GGAGCAGGAG
GTCAATGAGC CGCATCTGGT GCGCCACCTG CTGCAGGAAG ACACGCTGGT GGGTGCGCGC
GTGGCCGGCG ATGCGGGCAA GGTCTACACC GACTTCGCCA TCCATGCCGA TGGCTTCTCG
CGCATGCTGC TGCTGGCCGG CGAGTCATTG TCGCCACGCC GCCTGGGGCG GCTAGTGCAG
CGGCTGCTGG AGATCGAGAC CTACCGCATG GCGGCCCTGC TGGGCCTGCC GGCAGCCCGC
CAGGCCGCTG CCGTACTGGC CACGGCCGAG CGGGATCTGG CGGCCCTGGC CCATTCCATC
CGTCTTGCCG ACCGCGATGC CGAGCCGGCA CTGCTGGACC GGCTGACACG CCTGGCCGGG
CAGGTGGAGA GCGAATACGC CACCACGCAT TCGCGCTTTT CCGCCAGCGC GGCCTATTTC
GAGCTGGTGG ACAAGCGCAT TCAGGACATC CAGGAATCGC GCATCGACGG CATACAGACC
ATCCGCGAGT TCATGGACCG GCGCCTGACG CCGGCGCGCA GCACCTGCGA ATGGGCAGCG
CGGCGGCAGA ACGCGCTGTC CGAGCGCGTC TCGCGCGTCA GCAGCCTGCT GCGCACGCGG
GTAGAGATCG AGCAGCAGCA AAGCAGCCAG CAGTTGCTGG GCGCCATGAA CCAGCGCCAG
GACATGCAGT TGAAGTTGCA GTCCACGGTG GAAGGCCTGT CCGTGGCCGC CATCACCTAC
TACTTCACGG GCCTGATCAG CTACCTGGCC AAGGGCGCCA AGACGCTGGG CTGGCCCTGG
TCGCCGGAGA GCACGGCCGC CGTCGCCATT CCCGTGGTGG CACTGGGCGT ATGGTGGTCG
CTGCGCAGGC TGCACCACAG ATTGTTCCGT GGCCAGCACG GGTCCGGCAC GCACTGA
 
Protein sequence
MSPLLSSQHP QRVLLHNEIH ARPAEEMQAP LAITHVVMLT DAAQREASRA HVATLLRNHH 
LPPPDAATTH VLIDLGAFHL RWELHTEFVC WTFSKPMSQA GMDDVREPEA AIDYVPRDWL
AALPGQCLSG LHLWALQEQE VNEPHLVRHL LQEDTLVGAR VAGDAGKVYT DFAIHADGFS
RMLLLAGESL SPRRLGRLVQ RLLEIETYRM AALLGLPAAR QAAAVLATAE RDLAALAHSI
RLADRDAEPA LLDRLTRLAG QVESEYATTH SRFSASAAYF ELVDKRIQDI QESRIDGIQT
IREFMDRRLT PARSTCEWAA RRQNALSERV SRVSSLLRTR VEIEQQQSSQ QLLGAMNQRQ
DMQLKLQSTV EGLSVAAITY YFTGLISYLA KGAKTLGWPW SPESTAAVAI PVVALGVWWS
LRRLHHRLFR GQHGSGTH