| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5391 |
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| Symbol | |
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| ID | 5751006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5983398 |
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| End bp | 5984195 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300519 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001566405 |
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| Protein GI | 160900823 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.602708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.800249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGG GAATCGCGGG CAAGTGGGCC CTGGTATGTG GCGCCAGCAA GGGACTGGGC
TTTGGCTGTG CCAAGGCGCT GGCGCAAGAG GGCGTGAACC TGGTGATCAA TGCGCGCAAT
CCCGAGGCCC TGCAGGAAGC TGCGGCCAGC CTCGCCGCCC TGGCGCCGCA GGTGAAGGTG
CTGGCCGTGG CGGCCGACAT CACCACCGAG GAAGGCCGCG CCGCCGTGCT GTCGGCAGCT
GGCGGCCCGG GCGTGGATTT CGACATCGTC GTCACCAATG CCGGCGGCCC GCCTCCCGGT
GATTTCCGCG ACTGGGACCG CGCGGCCTGG CTCAAGGCCG TGGACGCCAA CATGCTCACG
CCCATCGAGC TGATCAAGGC CACGGTGGAC GGCATGGCGG CGCGCGGATT CGGCCGCATC
GTCAACATCA CCTCCAGCGC CGTGAAGGCG CCCATCGACA TCCTGGGCCT GTCCAATGGC
GCGCGCAGCG GCCTCACGGG CTTTGTGGCG GGCCTGGCGC GCAGCGGCAT TGCGGCCAAG
GGCGTGACCA TCAACAACCT GCTCCCCGGC AAGTTCGACA CCGATCGCCT GCGCACCACC
TTCACGGCCG CCGCCAACAA GAGCGGCAAG AGCCTGGACG ATGTGCGCCT GGTGCAGCAA
TCCCAGGTGC CGGCCCGCCG CTTCGGCTCG CCCGATGAAT TCGGCGCCAT CTGTGCCTTC
CTGTGCAGCG CGCACGCAGG CTACATGACG GGTCAGAACA TCCTGCCCGA CGGCGGCCTG
TACGCAGGAA CCTTCTGA
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| Protein sequence | MDLGIAGKWA LVCGASKGLG FGCAKALAQE GVNLVINARN PEALQEAAAS LAALAPQVKV
LAVAADITTE EGRAAVLSAA GGPGVDFDIV VTNAGGPPPG DFRDWDRAAW LKAVDANMLT
PIELIKATVD GMAARGFGRI VNITSSAVKA PIDILGLSNG ARSGLTGFVA GLARSGIAAK
GVTINNLLPG KFDTDRLRTT FTAAANKSGK SLDDVRLVQQ SQVPARRFGS PDEFGAICAF
LCSAHAGYMT GQNILPDGGL YAGTF
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