| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5384 |
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| Symbol | |
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| ID | 5750999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5972298 |
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| End bp | 5975153 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300512 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_001566398 |
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| Protein GI | 160900816 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.515225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT CGAAAGTCTC TCCCAACGCC AATGCGGGCT ATCGCGCCAC GCTGAACATG
CCCGACACGC CCTTCCCCAT GCGCGGCGAC CTGCCCAAGC GCGAGCCGGG CTGGGTCCAG
GAATGGGAGG ACAAGGGGCT CTACAAGAAG CTGCGCGACG CGCGCCACGG CGCGCCCAAG
TTCATCCTGC ATGACGGCCC GCCCTACGCC AACGGCAAGA TCCACATCGG CCATGCGGTG
AACAAGGCGC TCAAGGACAT GATCGTCAAG AGCCGCCAGC TCGAAGGCTT CGACGCGCTG
TACGTGCCGG GCTGGGACTG CCACGGCCTG CCCATCGAGA ACGCCATCGA AAAGCTGCAT
GGCCGCAACC TGCCGCGCGA CGAGATGCAG GCCAAGAGCC GCGCCTTCGC CACCGAGCAG
ATCGCCCAGC AGATGGTGGA CTTCAAGCGC CTGGGCGTGC TCGGCGACTG GGACCATCCC
TACAAGACCA TGAACTACGC CAACGAGGCC GCCGAGCTGC GCGCCCTCAA GCGCGTCATG
GAGCGCGGCT TCGTCTACCG CGGCCTCAAG CCCGTGTACT GGTGCTTTGA CTGCGGCTCC
TCGCTGGCCG AGTTCGAGAT CGAATACGCC GACAAGCAAA GCCAGACGCT GGACGTGATG
TTCCCCACGG CCGCGCCCGA CAGGCTGGCG GCCGCCTTCG GCCTGCCCTC GCTGGCCAAG
CCGGCCTTCA TCGTCATCTG GACGACGACG GCCTGGACCA TCCCCGCCAA CCAGGCGCTC
AACGTCAACC CCGAGCTGGA ATACAGCCTG GTGGACACCG AGCGCGGCCT GCTGATCGTG
GCCTCGGCCC TGGTCGAGAA GTGTCTGGCA CGCTGGAAGC TCGAAGGCCA GGTCGTCGCC
ACCGCCGTGG GCAGGAAGCT GGACCACCTG CAGTTCAAGC ACCCGCTGGC CGATATGGAC
AAGGGCTTCG ACCGCGTCTC GCCCGTGTTC CTGGCCGACT ACGCCACGGC CGATGACGGC
ACCGGCATCG TGCACTCGGC CCCCGCCTAT GGCGTGGACG ACTTCAACAG CTGCATGAAC
AACGGCATGA CGCGCGAAGA CATCCTGAGC CCCGTGCAGG GCAACGGCGT CTACGCACCC
GAGCTGCCGC TGTTCGGTGG CCAGCACATC TGGAAGGCCA CGCCCGCCAT CATCGACGCG
CTCAAGCTGG CCGGCCGCCT GATGGACACC AAGACCATCA CCCACAGCTA CCCGCACTGC
TGGCGCCACA AGACGCCCGT GATCTACCGC GCCGCAGCCC AGTGGTTCAT CCGCATGGAC
GAAGGCGAGG GAGTGTTCAC CAAGCCCGGC GACAAGCCCG CGCAGACGCT GCGCCAGATC
GCGCTGGAGG CCATCGAGCA CACCCAGTTC TACCCGGAGA ACGGCAAGAC CCGCCTGCGC
GACATGATCG CCGGCCGCCC CGACTGGTGC ATCTCGCGCC AGCGCAGCTG GGGCGTGCCC
CTGCCCTTCT TCCTGCACAA GGACAGCGGC GAGCTGCACC CGCGCACCAT GGAGATCATC
GACCAGGCGG CCGCCATGGT CGAGCAGGGC GGCATCGAGG CCTGGAGCCG CGTGACGGCC
GAGGACATCC TGGGCGCCGA GGAGGCCGTG CACTACACCA AGAGCACCGA CATCCTCGAA
GTCTGGTTCG ACTCCGGCTC CACCTTCTGG CACGTGATGC GCGGCACGCA CGCCGACATG
CACCACGACC AGGGCCCCGA GGCCGACCTC TACCTGGAAG GCCATGACCA GCACCGCGGC
TGGTTCCATT CGTCGCTGCT GCTGGCCTCG GCCATCTTCG GTCGCGCGCC CTACCGCGGC
CTGCTGACGC ACGGATTCAC CGTGGACGGC CAGGGCAAGA AGATGTCCAA GTCGCTGGGC
AACACCGTCG CCCCGCAGGA CGTGAGCAAC AAGATGGGCG CCGAGATCAT CCGCCTGTGG
GTGGCCTCGA CCGACTACTC GGGCGACCTG GGCATCGACG ACAAGATCCT GGCCCGCGTA
GTGGATGCCT ACCGCCGCAT CCGCAACACG CTGCGCTTCC TGCTGGCCAA CGTCAGCGAC
TTCGATGCTG CGCAGGACTC GGTTCCCACC GAAGAGCTGC TGGAGATCGA CCGCTGGGCC
CTGGCCCGCG CCGCCCAGTT CCAGGCCGAG CTGCTGGCCC ACTACAAGGT CTATGAATTC
CACCCCGTGG TGGCCAAGCT GCAGCTGTTC TGCTCGGAAG ACCTGGGCGG CTTCTACCTG
GACGTGCTCA AGGACCGCCT GTACACCAGC GCGCCCAAGA GCCTGGCCCG CCGCAGCGCC
CAGACCGCCC TGCACCAGAT CACGCATGCC ATGCTGCGCT GGATGGCGCC CTTCCTATCC
TTCACGGCCG AGGAGGCCTG GAAGGTCTTC GGCGACAGCG AGTCCATCTT CCTGGAGACC
TACACCGACC TGCCGGCCGG TGACGAGGCC CTGCTGGCCA AGTGGGCGCG CCTGCGCGAG
ATCCGCGACG TGGTGAACAA GGACATCGAG GCCGTGCGCA CCGAAGGCCG GGTCGGCTCC
TCGCTGCAGG CCGAAGTCAG TGTCTCGGCC CAGCCCGAAG ACCTGGCCCT GCTGCAAAGC
CTGGGCGACG ACCTGAAGTT CGTCTTCATC ACCTCGGCGG CCGAGGCCCT GGCAGGCGAG
GCCCTGCAGG CCGCCGTCAC ACCCAGCAGC CATGCCAAGT GCGACCGCTG CTGGCACTAC
CGTGCCGACG TGGGCATCAA CCCCGAGCAC CCCAGCCTGT GCGGCCGTTG CGACAGCAAC
CTGCACGGTG CTGGCGAAGA GCGCCACAAG GCGTAA
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| Protein sequence | MSDSKVSPNA NAGYRATLNM PDTPFPMRGD LPKREPGWVQ EWEDKGLYKK LRDARHGAPK
FILHDGPPYA NGKIHIGHAV NKALKDMIVK SRQLEGFDAL YVPGWDCHGL PIENAIEKLH
GRNLPRDEMQ AKSRAFATEQ IAQQMVDFKR LGVLGDWDHP YKTMNYANEA AELRALKRVM
ERGFVYRGLK PVYWCFDCGS SLAEFEIEYA DKQSQTLDVM FPTAAPDRLA AAFGLPSLAK
PAFIVIWTTT AWTIPANQAL NVNPELEYSL VDTERGLLIV ASALVEKCLA RWKLEGQVVA
TAVGRKLDHL QFKHPLADMD KGFDRVSPVF LADYATADDG TGIVHSAPAY GVDDFNSCMN
NGMTREDILS PVQGNGVYAP ELPLFGGQHI WKATPAIIDA LKLAGRLMDT KTITHSYPHC
WRHKTPVIYR AAAQWFIRMD EGEGVFTKPG DKPAQTLRQI ALEAIEHTQF YPENGKTRLR
DMIAGRPDWC ISRQRSWGVP LPFFLHKDSG ELHPRTMEII DQAAAMVEQG GIEAWSRVTA
EDILGAEEAV HYTKSTDILE VWFDSGSTFW HVMRGTHADM HHDQGPEADL YLEGHDQHRG
WFHSSLLLAS AIFGRAPYRG LLTHGFTVDG QGKKMSKSLG NTVAPQDVSN KMGAEIIRLW
VASTDYSGDL GIDDKILARV VDAYRRIRNT LRFLLANVSD FDAAQDSVPT EELLEIDRWA
LARAAQFQAE LLAHYKVYEF HPVVAKLQLF CSEDLGGFYL DVLKDRLYTS APKSLARRSA
QTALHQITHA MLRWMAPFLS FTAEEAWKVF GDSESIFLET YTDLPAGDEA LLAKWARLRE
IRDVVNKDIE AVRTEGRVGS SLQAEVSVSA QPEDLALLQS LGDDLKFVFI TSAAEALAGE
ALQAAVTPSS HAKCDRCWHY RADVGINPEH PSLCGRCDSN LHGAGEERHK A
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