| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5375 |
|---|
| Symbol | |
|---|
| ID | 5750990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5959840 |
|---|
| End bp | 5960955 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300503 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001566389 |
|---|
| Protein GI | 160900807 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.932772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTG ATTTTTCGGA TGACCAGCAG CAACTGCGCG ACGCCGTGCG CCGCTGGGTG
GACAAGGGCT ATACCTTCGA GCGCCGCCGC TCCATCGTCG AGGCGGGCGG TTTTTCGCGC
GAGGTCTGGG GCGAGCTCGC CGAACTGGGC CTGACGGCCT TGACCGTGCC CGAGGAGCAC
GGTGGCCTGG GCCTGGGCGC CACCGACGTG ATGGTGGTGA TGGAGGAGTT GGGCCGCGGC
CTGGTGATGG AGCCGCTGGC GCAGGCCTTT GTGGCCGCCG GCGTGCTCGG CAAGCACGCC
GACGCTTCCG TGGCCGGCCA GTGGCTGCCG CGCGTGGCAA GCGGCGAGGC CCTGGTCGTG
CTGGCACACC AGGAGCGCCA GGCCCGCTAC CGCCTCGATG TCTGCGCCGC CAAGGCCAGC
AAGAGCGGCA GCGGCTACAC GGTGGACGCC ACCAAGAGCG TGGTGCCCGC AGGCGACGCG
GCCGACGCCT TTCTGGTGCC AGCCCAGCTG GACGGCAAGA TCGCCCTCTT CCTGGTGGAG
CGCGGCGCCA GCGGCGTCAG CACCCAGGGC TACCGCACCC AGGACGGCAG CCGCGCGGCC
GAGCTGCGCT GCCAGGCGGC CCCCGCCACG CTGGTGACGG CCGATGGCCT GGCCGCCCTC
ACGCTGGCCC AGGACGCCGC CAACGCCGCG CTGTGCGCCG AAGGCGTGGG CGCCATGGAG
CAGACGCTGA AGCTGACCAC CGAGTACATG AACCAGCGCA AGCAGTTCAA CACGGTGATC
GCCAGCTTCC AGGCCCTGCG CCACCGCGTG GCCGACATGA AGATGCAGCT GGAGCTGGCC
CGCTCCATGA GCTATTACGC CAGCCTCAAG ATGAGCGCAG CCGATGCCGA GCGCCACGTG
GCCATCGCGC GCGCCAAGGT CCAGCTGGGC CAGTCGCTGC GTTTTGTCGG CCAGCAGTCA
GTCCAGCTGC ACGGCGGCAT CGGCGTGACC GACGAGTACG CGGGCAGCCA CTACTTCAAG
CGCCTGACTC AGATGGAGAT GACGGGCGGT GACACCCTGC ATCACCTGGG CATCGTCTCC
GCGAAGATGC AGGACACGGC CGGCGTGTTT GCCTGA
|
|---|
| Protein sequence | MDFDFSDDQQ QLRDAVRRWV DKGYTFERRR SIVEAGGFSR EVWGELAELG LTALTVPEEH
GGLGLGATDV MVVMEELGRG LVMEPLAQAF VAAGVLGKHA DASVAGQWLP RVASGEALVV
LAHQERQARY RLDVCAAKAS KSGSGYTVDA TKSVVPAGDA ADAFLVPAQL DGKIALFLVE
RGASGVSTQG YRTQDGSRAA ELRCQAAPAT LVTADGLAAL TLAQDAANAA LCAEGVGAME
QTLKLTTEYM NQRKQFNTVI ASFQALRHRV ADMKMQLELA RSMSYYASLK MSAADAERHV
AIARAKVQLG QSLRFVGQQS VQLHGGIGVT DEYAGSHYFK RLTQMEMTGG DTLHHLGIVS
AKMQDTAGVF A
|
|---|
| |