Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5370 |
Symbol | |
ID | 5750985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5955377 |
End bp | 5956789 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641300498 |
Product | Fmu (Sun) domain-containing protein |
Protein accession | YP_001566384 |
Protein GI | 160900802 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.503548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGCTG CGCCAGCCGG GGGCTGCTGC GGGTTCCGAC CTGTGGCCCT CTCGGATTTG CAAGGCAGTG GGACAATTGC GCCCATGCAT CCCAAACAGC TTCTCGACGC CTGCGCCGAA CTGGTCAAGC GCACCCTGAC TTTCGAACAC CCGGCCGACG CCGTGGTGTC ACGCTTTTTC CGTGAAAACC GCAACCTGGG CCCGCGCGAG CGTGCCGCGC TGGCCGAAAC CGCCTACACC GTGCTGCGCA AGAAGCTGCT TTTTGAGAGC CTGGCACGTT CTGGCAGCGG CTCGCGTGAG CGCAGACTGG CCATCCTGGG CTTTGCCCAT AGCCAGGAAG CCCTGGCCCG CGTGGCCGGC AAGTCCGAGC AGGGCGTCAA GGAGGCGCTC GGCTTTGCGC GCGCGGCGCT GTCCCCCCAG GAACTGCAAT GGCTGGACGC CTGCGATGCC GTGCGCCCCG ATGAGCTGAT GGAGCCGCAC CGCCACAACC TGCCCGAGTG GCTGGTCGCG CCGCTCAAGC AGCAGCTGGG TGAAGATTTC TGGGCCTTTG CCCAGAGCAT GGAGCAGGCC GCACCGCTGG ATCTGCGCGT CAATGCGCTG AACGCCAAGC GCGCCGATGT GCAAAAGGAA CTGGCCGATG CCGGCATCGC CGCCGAAGCC ACGCCGTACT CGCCCTGGGG CCTGCGCGTG CAGGGCAAGC CTGCGCTGGC CCGGCTGGAC GCCTTCACGC GCGGCGCCAT CGAGGTGCAG GATGAAGGCT CCCAGCTGCT GGCGCTGATG CTGGACGCCA AGCGCGGCGA AATGGTGGTC GATTTCTGCG CCGGCGCAGG CGGCAAGACC CTGGCCATTG GCGCGTCCAT GCGCAGCACG GGGCGCCTGT ACGCCTTCGA TGTGTCCGGC CACCGGCTCG AAGCCCTGAA GCCGCGCCTG GCGCGCTCGG GCCTGTCGAA CGTGCACCCC GCGGCCATCG CCCATGAGCG CGACGACCGC GTCAAGCGCC TAGCCGGCAA GATCGACCGC GTGCTGGTCG ATGCGCCCTG CTCGGGCCTG GGCACGCTGC GCCGCAATCC CGACCTCAAG TGGCGTCAGT CGGCCAAGGC CATCGAGGAG CTCACGCAAA AGCAGGCGGC CATCCTGGCC AGTGCAGCGC GTCTGGTCAA GCCGGGTGGG CGTCTGGTCT ATGCCACCTG TTCGGTCCTG CCCCAGGAAA ACGAAGCCAT CGCCGAGGCC TTTGCATCGG AGCACTCTGA CTTCGTGGCC ATGGATGCCG GCGAACTGCT GGCCCAGCTC AAGGTGGAGC AGGGCAATGC GCTGTGCAGC GGCGGCGAGA CCGGCACGCA GTACCTGCGC CTGTGGCCGC AGCGCCATGA GACGGACGGA TTTTTCGCCG CCGTTTGGAC CCGGAAGCCG TAA
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Protein sequence | MVAAPAGGCC GFRPVALSDL QGSGTIAPMH PKQLLDACAE LVKRTLTFEH PADAVVSRFF RENRNLGPRE RAALAETAYT VLRKKLLFES LARSGSGSRE RRLAILGFAH SQEALARVAG KSEQGVKEAL GFARAALSPQ ELQWLDACDA VRPDELMEPH RHNLPEWLVA PLKQQLGEDF WAFAQSMEQA APLDLRVNAL NAKRADVQKE LADAGIAAEA TPYSPWGLRV QGKPALARLD AFTRGAIEVQ DEGSQLLALM LDAKRGEMVV DFCAGAGGKT LAIGASMRST GRLYAFDVSG HRLEALKPRL ARSGLSNVHP AAIAHERDDR VKRLAGKIDR VLVDAPCSGL GTLRRNPDLK WRQSAKAIEE LTQKQAAILA SAARLVKPGG RLVYATCSVL PQENEAIAEA FASEHSDFVA MDAGELLAQL KVEQGNALCS GGETGTQYLR LWPQRHETDG FFAAVWTRKP
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