Gene Daci_5369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5369 
Symbol 
ID5750984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5954038 
End bp5955261 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content67% 
IMG OID641300497 
Productfatty acid desaturase 
Protein accessionYP_001566383 
Protein GI160900801 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.479169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGG ATTTCGGATC GGTTTGGAAC CTCGCCGTGG ATTGGATGGC CCATGGCCTG 
TGGCAGCTGT CGTGGTGGCA GCTGCTGCTG TACGCCCTGG TCACCACCCA CATCACCATT
GCGGGCGTCA CCATCTTCCT GCACCGCTGC CAGGCCCACC GCTCGCTGGA CCTGGGGCCG
GTTCCTTCGC ACTTCTTCCG GTTCTGGCTG TGGCTGGGCA CGGGCATGGT CACCAGGGAG
TGGGTGGCCA TCCACCGCAA GCACCATGCC AAGTGCGAAA CCGAGGACGA CCCCCACAGC
CCGCAGACAC GCGGCCTGGA CACCGTGATG CGCCAGGGTG CGGAGCTGTA CCGCGAAGAG
GCGGCGAACG CCGAGACACT CAGGAAGTTC GGCCACGGCA CGCCCGACGA CTGGATCGAG
CGCCATCTCT ACAGCCGGCA TTCGATCTGG GGCCCTTCGC TGATGCTGAT CATCGACGTG
CTGCTGTTCG GCGCCATCGG GCTGACGATC TGGGCCGTGC AGATGGCCTG GATTCCGTTC
TGGGCTGCCG GCGTGGTCAA CGGCCTGGGC CATTTCTGGG GCTACCGCAA CTTCGAGGCC
CAGGATGCCA GTACCAACCT CGTGCCCTGG GGCCTGATCA TTGGCGGCGA GGAACTGCAC
AACAACCACC ATACCTACCC GACCTCCGCG AAGTTCTCGG TCAAGCGCTA TGAGTTCGAC
ATGGGCTGGG TCTACATCAG CGCCATGCAG AAGCTGGGCT GGGCCAAGGT CAAGAAGACG
GCGCCGCGGC TGGTCATGGG CGCCGTCAAG CCCGTGGCCG ACGAAAAGAC GCTGGAGGCC
GTGATCGCCA ACCGCTACGA GGTCATGGCC CGCTATGCGC GCGGCGTGCG CGCCGCCGTG
CAGATCGAGC TCGATGCGCT CAAGCAGCGC AAGGCCCGGC AGGCCGACCT GTCCCTGCTC
AGGACGGCGC GCCGCTGGCT GCACCGCGAT GCCGACAAGG TGCCCGCCCA GGCACAGGGG
CAACTGGCCC AGGCGCGCGC AGCCCACCCC GTGCTCGACC AGATGCTGGT CATGCGCGAG
GAGCTGCGCC AGCTGTGGCT GAACACCTCG CTGTCGCGCG AGCAACTGAC GGCCCATCTG
CAGGCCTGGT GCCATCGCGC CGAGGCCAGC GGCATTGCCG CGCTCAAGGA GTTCTCCGTC
AAGCTGCGCG CTGCCCACGC CTGA
 
Protein sequence
MSLDFGSVWN LAVDWMAHGL WQLSWWQLLL YALVTTHITI AGVTIFLHRC QAHRSLDLGP 
VPSHFFRFWL WLGTGMVTRE WVAIHRKHHA KCETEDDPHS PQTRGLDTVM RQGAELYREE
AANAETLRKF GHGTPDDWIE RHLYSRHSIW GPSLMLIIDV LLFGAIGLTI WAVQMAWIPF
WAAGVVNGLG HFWGYRNFEA QDASTNLVPW GLIIGGEELH NNHHTYPTSA KFSVKRYEFD
MGWVYISAMQ KLGWAKVKKT APRLVMGAVK PVADEKTLEA VIANRYEVMA RYARGVRAAV
QIELDALKQR KARQADLSLL RTARRWLHRD ADKVPAQAQG QLAQARAAHP VLDQMLVMRE
ELRQLWLNTS LSREQLTAHL QAWCHRAEAS GIAALKEFSV KLRAAHA