| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5354 |
|---|
| Symbol | |
|---|
| ID | 5750969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5938619 |
|---|
| End bp | 5939548 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641300482 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001566368 |
|---|
| Protein GI | 160900786 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.764467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATAC TGCTTCAGCA GGTCATCAAC GGATTGGTCC TGGGCAGCAT GTACGCCCTG
ATCGCCCTGG GCTACACCAT GGTGTACGGC ATCATCCAGC TCATCAACTT CGCCCATGGC
GAGGTGCTCA TGGTCGGCGC GCTGACCAGC TGGAGCTGCA TAGGCCTGAT GCAGGAGGCC
ATGCCCGGTG CGCCGGGCTG GCTGATCCTG CTGCTGGCGA CCGTGATCGC CTGCGTGGTG
GCCGCGGCAC TGAATTTCGT GATCGAGAAA GTGGCCTACC GCCGCCTGCG CAGCAGCCCG
CGCCTGGCGC CGCTGATCAC GGCCATCGGC GTCTCGCTGC TGCTGCAGAC GCTGGCCATG
ATCATCTGGA AGCCCAACTA CAAGGCCTAT CCCACGCTGC TGCCGAGCAC GCCCTTCGAG
ATCGGCACGG CGGTGATCAC GCCCACCCAG ATCCTGGTGC TGGTGGTCAC GGCGATTGCG
CTGGCATCGC TGACCTATCT GGTCAACTAC ACCAAGCTCG GGCGCGCCAT GCGGGCCACG
GCCGAGAATC CGCGCGTGGC GGCCTTGATG GGCGTCAAGC CCGACGTGGT GATCTCGGCC
ACCTTCATCA TCGGCGCCGT GCTGGCGGCC ATCGCGGGCA TCATGTACGC CTCCAACTAC
GGCACGGCCC ACCACACCAT GGGCTTTCTG CCGGGGCTCA AGGCCTTCAC GGCGGCCGTG
TTCGGCGGCA TCGGCAACCT GGCCGGCGCC GTGGTCGGCG CCATGCTGCT GGGGCTGATC
GAGTCCATTG GCTCGGGCTA CATCGGCGAC CTCACGGGCG GCGTATTGGG CAGCCACTAC
ACCGACATCT TCGCCTTCAT CGTGCTCATC ATCATCCTGA CGCTGCGCCC CTCGGGCCTG
CTGGGTGAGC GTGTGGCCGA CCGCGCCTGA
|
|---|
| Protein sequence | MDILLQQVIN GLVLGSMYAL IALGYTMVYG IIQLINFAHG EVLMVGALTS WSCIGLMQEA
MPGAPGWLIL LLATVIACVV AAALNFVIEK VAYRRLRSSP RLAPLITAIG VSLLLQTLAM
IIWKPNYKAY PTLLPSTPFE IGTAVITPTQ ILVLVVTAIA LASLTYLVNY TKLGRAMRAT
AENPRVAALM GVKPDVVISA TFIIGAVLAA IAGIMYASNY GTAHHTMGFL PGLKAFTAAV
FGGIGNLAGA VVGAMLLGLI ESIGSGYIGD LTGGVLGSHY TDIFAFIVLI IILTLRPSGL
LGERVADRA
|
|---|
| |