Gene Daci_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5352 
Symbol 
ID5750967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5936717 
End bp5937511 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID641300480 
ProductABC transporter related 
Protein accessionYP_001566366 
Protein GI160900784 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA CGGCAGACAA CGGCTCTACC TCCCCGGTGC TCAGGGTTTC GGGCATTTCC 
AAGCGCTTTG GCGGACTGCA GGCCCTGTCC GATGTGGGCA TGACCATTGG CCGTGGCCAG
GTCTACGGCC TGATCGGTCC CAACGGCGCG GGCAAGACCA CTTTCTTCAA CGTGATCACG
GGCCTGTACA CGCCCGACAG CGGCAGCTTC GAGCTGGCCG GCAAGGCCTA CGAGCCCTCG
GCCGTGCACA AGGTGGCCAA GGCCGGCATT GCGCGCACCT TCCAGAACAT CCGGCTGTTT
GCCGAGATGA CTGCGCTGGA GAACGTGATG GTCGGGCGCC ATGTGCGCAC GCATTCGGGC
CTGATCGGCG CGGTGTTCCG CACGCCCGGC TTCAAGGCCG AGGAAGCCGC GATACGCGCG
CGGGCCCGCG AACTGCTGGA CTACGTGGGG ATTTCCAAAT ACGCCGACTT CAAGGCCCGT
ACGCTGAGCT ACGGCGACCA GCGCCGCCTG GAGATCGCGC GGGCGCTGGC CACCGACCCG
CAACTGATCG CGCTGGACGA GCCTGCCGCC GGCATGAACG CCACCGAGAA GGTGCAGCTG
CGCGAGCTGA TCGACCGCAT TCGCCGGGAC CAGCGCACCA TCTTGCTGAT CGAGCACGAC
GTGAAGCTGG TCATGGGCCT GTGCGATCGC GTCACCGTGC TGGACTATGG CAAGCCCATC
GCCGAAGGCA CGCCGGCCGA GGTGCAGAAG AACGACAAGG TGATCGAAGC CTATCTGGGC
ACCGGAGGAC ACTGA
 
Protein sequence
MANTADNGST SPVLRVSGIS KRFGGLQALS DVGMTIGRGQ VYGLIGPNGA GKTTFFNVIT 
GLYTPDSGSF ELAGKAYEPS AVHKVAKAGI ARTFQNIRLF AEMTALENVM VGRHVRTHSG
LIGAVFRTPG FKAEEAAIRA RARELLDYVG ISKYADFKAR TLSYGDQRRL EIARALATDP
QLIALDEPAA GMNATEKVQL RELIDRIRRD QRTILLIEHD VKLVMGLCDR VTVLDYGKPI
AEGTPAEVQK NDKVIEAYLG TGGH