Gene Daci_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5351 
Symbol 
ID5750966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5935967 
End bp5936713 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID641300479 
ProductABC transporter related 
Protein accessionYP_001566365 
Protein GI160900783 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGC AAGTGCAAGA CAAGGGCGTG TCCGCGCCGG TGCTGTTGAA GGTCCAGGGA 
CTGAAGGTGG CCTATGGGGG CATACAGGCC GTCAAGGGCG TGGACTTCGA GGTCCGCCAG
GGCGAGCTGG TCTCGCTGAT CGGCTCCAAC GGGGCGGGCA AGACCACGAC CATGAAGGCC
GTCACGCGCA GCCTGCAGAT GGCGGATGGC GACGTGCACT ACCTGGGCCG CAGCATCCGC
AACGTGGGCG CCTGGGATCT GGTGGCCCAG GGCCTGGTCA TGGTGCCGGA GGGGCGCGGC
GTGTTCGCGC GCATGACCAT CACCGAGAAC CTGCTCATGG GCGCCTACAC GCGCAACGAC
AAGGCCGGCA TTGCCGCCGA CATCGAGCGC ATGTTCGGCA TCTTCCCGCG CCTGAAGGAG
CGCCGCGACC AGCTGGCCGG CACCATGTCG GGTGGCGAGC AGCAGATGCT GGCCATGGCG
CGCGCGCTGA TGAGCCAGCC CAAGGTGCTG CTGCTGGACG AGCCCTCCAT GGGCCTGTCG
CCCATCATGG TGGACAAGAT CTTCGAGGTG GTGCGCGATG TGCATGCACT GGGCGTGACG
CTGGTGCTGG TCGAGCAGAA CGCCAGCCGT GCGCTGGCGC TGGCCGATCG CGGCTATGTG
ATGGAATCCG GCCTGATCAC CATGACCGGG CCCGGCCAGA CCCTGCTCAG CGATCCGCGC
GTGCGGGCCG CCTACCTGGG CGAGTGA
 
Protein sequence
MGEQVQDKGV SAPVLLKVQG LKVAYGGIQA VKGVDFEVRQ GELVSLIGSN GAGKTTTMKA 
VTRSLQMADG DVHYLGRSIR NVGAWDLVAQ GLVMVPEGRG VFARMTITEN LLMGAYTRND
KAGIAADIER MFGIFPRLKE RRDQLAGTMS GGEQQMLAMA RALMSQPKVL LLDEPSMGLS
PIMVDKIFEV VRDVHALGVT LVLVEQNASR ALALADRGYV MESGLITMTG PGQTLLSDPR
VRAAYLGE