| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5343 |
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| Symbol | trmD |
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| ID | 5750958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5930537 |
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| End bp | 5931307 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300471 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001566357 |
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| Protein GI | 160900775 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCG ACATCATCAC GCTGTTCCCT GAGCTGTTCA CGCCGTTTCT TGAAAGCGGC
GTCACGCGCC GTGCCTATGC CTCGGGCCAG GTCGGCGTGC ACCTGTGGAA TCCGCGCGAC
CATGCCCAGG GCAACTACCG GCGCGTGGAC GATCGCCCCT TTGGCGGCGG TCCGGGCATG
GTGATGATGG CCGAGCCGCT GCAGCGTTGC CTGGAGGCGG CCCGGCAGGC GCGCCGCGAG
GCCGGCGAGC CCGAGCCGGC TCCCGTGGTG CTGTTCTCGC CGATCGGCAC CACGCTGCGC
CATGCCGTGG TGGCCGAGTG GGCGCAGGGG CAGGGCGCAA TCTTGCTGTG CGGCCGCTAC
GAGGGCCTGG ACCAGCGCTT CATCGATACC CATGTCACGC ACCAGTTGAG CCTGGGCGAC
TTCGTGCTTT CTGGCGGCGA GATCGCTGCC ATGGCCCTGC TGGATGCCGT CGCGCGGCTG
CAGCCCGGCG TGCTCAATGA CGAAGGCAGT TTCCAGCAGG ACAGCTTCAA TCCGGCGCTC
GATGGCCTGC TCGATTGCCC GCACTACACC CGCCCCGAAG TCTGGGAAGG GCGGGAAGTG
CCGGCGCCAC TGTTGTCCGG CCACCACGCG CAGATCGAGC GCTGGCGCCG CGACCAGCGC
CTGTCCATCA CGGCCAGGCA CCGGCCCGAG CTGATAGAGC AGGCGCGCGC CCAGGGCCTG
CTCAACGCCA AGGACGAGGG GTTTTTGGCA AAAAACGTCT CCGGGCTATA A
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| Protein sequence | MRFDIITLFP ELFTPFLESG VTRRAYASGQ VGVHLWNPRD HAQGNYRRVD DRPFGGGPGM
VMMAEPLQRC LEAARQARRE AGEPEPAPVV LFSPIGTTLR HAVVAEWAQG QGAILLCGRY
EGLDQRFIDT HVTHQLSLGD FVLSGGEIAA MALLDAVARL QPGVLNDEGS FQQDSFNPAL
DGLLDCPHYT RPEVWEGREV PAPLLSGHHA QIERWRRDQR LSITARHRPE LIEQARAQGL
LNAKDEGFLA KNVSGL
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