Gene Daci_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5338 
Symbol 
ID5750953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5926779 
End bp5927096 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID641300466 
Producttranscriptional coactivator/pterin dehydratase 
Protein accessionYP_001566352 
Protein GI160900770 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAACAAC AGGACTGGTC CACGCAGCAG CGCCGCGCGC TGACGCCGGA CGAATTGCGC 
ACCGCACTGG CGGCCCTGCC GGGCTGGCAG CTCGATGGCG ATGCCATCGC CAAGAGCTAC
GCCTTTGCCA ATTACTACGA GACCATGGCC TTCGTGAACG CGCTGGCCCT GATCGCCCAC
CAGCAGGACC ACCACCCCGA TCTGACCGTG AGCTACGGCC GTTGCGGTGT GCGCCTGAAC
ACGCATGACG TGAACGGCAT CTCGTCCACC GACATCGAGT GCGCCCGCCG CATCGATGCG
CTGCTGGAGC ATCCATGA
 
Protein sequence
MQQQDWSTQQ RRALTPDELR TALAALPGWQ LDGDAIAKSY AFANYYETMA FVNALALIAH 
QQDHHPDLTV SYGRCGVRLN THDVNGISST DIECARRIDA LLEHP