| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5336 |
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| Symbol | |
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| ID | 5750951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5922422 |
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| End bp | 5924545 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300464 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001566350 |
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| Protein GI | 160900768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.904936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACCC AACCGTCGAG AAAAGCGTGC CAGATCGCTG ACTGCGCGTG CTTTTCGTTA
GAGCCATTCA TGAACGATAT CTCTCAAGAG CAGGGCATCA TTGCCGCTGC CGATTCCTCT
TTTGCTTCCG CCGCTGAAGC ATCTTCCGTG CTGAACGCCG CCGTTGCCAG CGCCGAGCAG
GCCGCCGAAT CCCTGGCCGC CGCCGAAGTC GTGGAAATCG CCGAAGGCGC CGAGGATGTT
GAAGCAGCCC CCGAACTGCC CAATGCCTTC ATCGAGCTGG GCCTGGCTGA AGAGCTGGTC
CGTGCCGTTG CCGATCTGGG CTACACCCAG CCCACGGCCG TGCAGGCGCA AGCCATTCCC
CTGGCCATGG GCAGCGATGA CCAGGCCTTC ATCGACCTGA TGGTGTCCAG CCAGACCGGC
TCGGGCAAGA CCGCTGCCTT CCTGCTGCCC GTGCTGCACA CGCTGATCCA GCAAAAGGCT
GACGAAGAAG CCGCCATCCG CGCCGAATAT GACCGCCAGT GCGCCGAAGC AACGGCCAGC
GGCCAGCCCA CCCCCAAGCG CAACAAGCGC AAGGACCCCA CGAATCCCCG CAACTTCAAG
GCAGCCGTTC CCGGCGCCCT GATCCTGTGC CCCACGCGCG AGCTGGCACA GCAGGTGGCG
CATGACGCCA TCGAGCTGGT CAAGCACTGC CGCGGCATCC GCATCGCCAA CGTGGTGGGC
GGCATGCCCT ACCAGCTGCA GATCGCCAAG CTGCAGAACG CCAACCTCGT GGTGGCCACT
CCCGGCCGTC TGCTGGACCT GCAGCGCTCG ATGCAGATCA AGCTCGACCA GGTGCAGTTC
CTGGTGGTGG ACGAAGCCGA CCGCATGCTG GACCTGGGCT TCTCGGACGA TCTGGCCGAA
GTCAACGACC TGACGGCACA GCGCAAGCAG ACCATGATGT TCAGCGCCAC CTTCGCGCCC
CGCATCCAGC AACTGGCCAT GCGCGTGATG CATGACGGCG GCTCCGGCGT GAAGAAGGTC
ACCATCGACA CGCCTCAGGA AAAGCACGCC AGCATCAAGC AGGTGCTGTT CTGGGCCGAC
AACTCCCAGC ACAAGCGCAA GCTGCTGGAC CACTGGCTGC GCGACACCAC GATCAACCAG
GCCATCGTCT TCGCATCGAC CCAGGTCGAG TGCGACGGCC TGGCCAACGA CCTGCAGCAG
GACGGCTTCT CGGCCGTGGC ACTGCACGGC GCTCTGAGCC AGGGCCTGCG CAACCGCCGC
CTGATGGCGC TGCGCAGCGG TCAGGTGCAG GTGCTGGTGG CTACCGATGT GGCGGCACGC
GGCATTGACG TGCCCACCAT CACCCACGTC TTCAACTACG GCCTGCCCAT GAAGGCAGAG
GACTACACCC ACCGTATCGG CCGCACGGGC CGTGCCGGTC GCGAAGGTGT GGCCGTCACG
TTCGCGGAGT TCCGTGACCG TCGTCGCATT TTCGATATCG AGGCCTACAG CCGCCAGCAA
TTCAAGGCCG AAGTGATTCC TGGCCTGGAG CCCGCACAGC GCGCACCCAG CAGCAACGAA
GGCCGTGGCG GCCGTCGTGG CGGCGGTGGT TTTGAAAGCC GTGGCGGCGA TCGCCGTGGT
GCCGGCGGCG GTGGCCGTGG CGGTTTCGGT GGTGATCGTG GCTTTGGCGG CGATCGCGAG
CGCAGCTTCG GTGATCGCGG TGGCGATCGT GGCTTCGGCG CACGCCGTGA TTCCGAAGGC
TATGGCCGCA AGGCTGGCTT CGGTGGCTTC GGCGGTGGCC AGCGCGAAGG CGGCTTCGGC
CAGGGCCAAG GTCAGCGCGA AGGCGGCTAC AGCCAGGCTC CGCGTGAAGG CGGCTACAGC
CAGGCCCCGC GCGAAGGCGG CTTTGGCCGT GGCGGTGAAG GCCGTGGCTT CAGCGGCGAC
CGTGGCGCTG CGCGTGGCGG CGATCGCCGT GACGGCGCTC CCCGCGAAGG CGGCTTCCGT
GGTGCATCCG GCGAGTCGCG CGGCTTTGGC GGTGGCGAAT CCCGTGGCGG CTTCGGCGGC
GGCGAGCGCC GTCCTGCCTT CGGCAAGAGC GCTCCCAAGC CTTACTCGCC CCAGGGCGGT
GATCGCAAGC GCGTCGTGCG CTGA
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| Protein sequence | MLTQPSRKAC QIADCACFSL EPFMNDISQE QGIIAAADSS FASAAEASSV LNAAVASAEQ
AAESLAAAEV VEIAEGAEDV EAAPELPNAF IELGLAEELV RAVADLGYTQ PTAVQAQAIP
LAMGSDDQAF IDLMVSSQTG SGKTAAFLLP VLHTLIQQKA DEEAAIRAEY DRQCAEATAS
GQPTPKRNKR KDPTNPRNFK AAVPGALILC PTRELAQQVA HDAIELVKHC RGIRIANVVG
GMPYQLQIAK LQNANLVVAT PGRLLDLQRS MQIKLDQVQF LVVDEADRML DLGFSDDLAE
VNDLTAQRKQ TMMFSATFAP RIQQLAMRVM HDGGSGVKKV TIDTPQEKHA SIKQVLFWAD
NSQHKRKLLD HWLRDTTINQ AIVFASTQVE CDGLANDLQQ DGFSAVALHG ALSQGLRNRR
LMALRSGQVQ VLVATDVAAR GIDVPTITHV FNYGLPMKAE DYTHRIGRTG RAGREGVAVT
FAEFRDRRRI FDIEAYSRQQ FKAEVIPGLE PAQRAPSSNE GRGGRRGGGG FESRGGDRRG
AGGGGRGGFG GDRGFGGDRE RSFGDRGGDR GFGARRDSEG YGRKAGFGGF GGGQREGGFG
QGQGQREGGY SQAPREGGYS QAPREGGFGR GGEGRGFSGD RGAARGGDRR DGAPREGGFR
GASGESRGFG GGESRGGFGG GERRPAFGKS APKPYSPQGG DRKRVVR
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