| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5335 |
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| Symbol | |
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| ID | 5750950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5920801 |
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| End bp | 5922270 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300463 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001566349 |
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| Protein GI | 160900767 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTCTT TGATCGCGTC CAGTGTGGAT TTTGAACACA TGTTCGAACT GGCCCCCGTC
TCGCTATGGC TGGAGGACTA CAGCGCGCTC AAGCAGCTGC TCGACCAGTG GCGTGCACAG
GGCGTGACCG ATCTGCAGGC GCATTTTCTG GCCCACCCCC AGGCGCTGCA GCAGTGCAGC
GCGGCGCTCA AGGTGGTGCG CGTCAACCAG CGCACGCTGG ACCTGTTCGG CGCCAGTGAC
CAGCAGACCT TTCTTGCCAG CCTGGGCCGG GTGTTCCGCG ATGACATGCA CGCCGGCCTG
GCCTGCGAGC TGGAGGATCT GTGGCAGGGC TCTCTGAGCT TTGCCAACCG CACCGCCAAC
TACACGCTGG ACGGGCGGCG GCTCGATGTG CAGATCCGTG GCCGCATCCT GCCCGGTCAT
GAAGCGCTTT GGGACTGCGT GCTGGTGTCG CTGGAAGACG TGACGGCCGA GATGCGCAGC
GCGCGCCAGC TGCACCGCAG CGAACAGTAC TCGCGCGACC TGTTCGAGTA CTCGCCCGTG
TCGCTGTGGG TCGAGGATTT CAGCGCCATC AAGCGCCTGC TCGACGACGT GCGCGCCCAG
GGCATCAGCG ACTTCGCCAC CTTCCTCAAG GTGCACCCGG AATTCGTCTC GCGCTGCATG
CAGGAGATTC GCGTCGTGGA CGTGAACCGC CAGACGCTGC GCATGTTCGG CGCCACCGAC
AAGCTGCAAC TGCTGAGCCG GCTGGGCCGC ATCTTCCGTG ACGAGATGAT CGACTCCTTT
GCCGATCAGT TGCAGGACCT TTGGAGCGGC AAGCTCGTGC AGCACCGCGA AGTGGTGAAC
TACGCCCTGT CAGGCGACGC TCTGCACATC CACATGCAGC TGGCCGTGCT CGATGGCCAT
GCCGATGACT GGGGGCTGGT GCTGCTGTCG CTGGTGGACA TCACGGCGCG CAAGAAGGCC
GAGGCCTACC TCGAATACCT GGGCAAGCAC GATGTGCTGA CCCAGTTGCG CAATCGCGCC
TTCTATATCG AGGAACTCAA TCGCCTGGCA CGCAAGGGGC CCTGGCCGCT GGCGGTGATT
GCCATCGACA TGAATGGCCT CAAGGAGGCC AATGACGAGC ATGGCCATGC CGCAGGCGAC
GACATGCTGC GCCGCGTGGG CGAAGTGCTG ACCAAGGCCG TGGATGCGCC TGCCTGCGCG
GCGCGCATAG GCGGCGACGA ATTCATGGTG CTTTTACCGG CTTCGGACGA GCGCGGCGCC
GAGGCGGTCA AGGAGCGCAT CCTCTCGCTG CTGGAGCTCA ACAACCAGTT CTATCCGGGC
CAGGCGGTCA GCCTGTCCAT GGGCGTGGCC TGCTGCGATT CGGGCAGCCA GGTCGAGGCC
ACCGTCTCGC GCGCCGACCA GGCCATGTAT GCCGAAAAGG CGCGCTACTA CAAGGAAAGA
ATGCTGGACC GCCGCGCGGG CCGCGCTTAG
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| Protein sequence | MESLIASSVD FEHMFELAPV SLWLEDYSAL KQLLDQWRAQ GVTDLQAHFL AHPQALQQCS
AALKVVRVNQ RTLDLFGASD QQTFLASLGR VFRDDMHAGL ACELEDLWQG SLSFANRTAN
YTLDGRRLDV QIRGRILPGH EALWDCVLVS LEDVTAEMRS ARQLHRSEQY SRDLFEYSPV
SLWVEDFSAI KRLLDDVRAQ GISDFATFLK VHPEFVSRCM QEIRVVDVNR QTLRMFGATD
KLQLLSRLGR IFRDEMIDSF ADQLQDLWSG KLVQHREVVN YALSGDALHI HMQLAVLDGH
ADDWGLVLLS LVDITARKKA EAYLEYLGKH DVLTQLRNRA FYIEELNRLA RKGPWPLAVI
AIDMNGLKEA NDEHGHAAGD DMLRRVGEVL TKAVDAPACA ARIGGDEFMV LLPASDERGA
EAVKERILSL LELNNQFYPG QAVSLSMGVA CCDSGSQVEA TVSRADQAMY AEKARYYKER
MLDRRAGRA
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