| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5333 |
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| Symbol | |
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| ID | 5750948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5918281 |
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| End bp | 5919279 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641300461 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001566347 |
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| Protein GI | 160900765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTT CTCGCCGCAC GTTGATATCG GCTCTGGCTC CGGCTGCGTT GCAACTGACT
GCCGGCGCTG CCTGGTCCAA GGGCCACCGA CTGCAGCTCT CGGCGGCCTA TGGCGATGGC
ATCTTCCACA CGCAGAACCT GCGCAACTTC GCGGCGCGCG TGCATGCCGA TACCCAGCAG
GCGCTGGAGA TCGATGTGGT GTCCAACTCT GCGCTCAAGC CAATGGCGCA GGTGCTTCCA
GCGCTCAAGC GCAATGAAAT CCAGTTCGGC GAAGTTCTCA TGTCGTCCTA TGTGGATATG
CATCCGCTGC TGGGCATGGA CTCGCTGCCT TTCATAGTGC GCGGCTTTGA CGAGGCCGCG
CGCCTGTGGC AACTGACCCG TCCCGTGCTG CAGGAATTTT TGCTGGCTCA GCAGGGTGTG
CGCCTGCTGT TTGCCGTGCC CTGGCCGGCG CAGGGCCTGT TCTGCCGGCG CCCGGTCAAC
AGCATCGTGG ATCTCAAGGG GCTCAGGCTG CGTGTGCAAA GCGATGCGAC CAAGCGGCTG
GCGGAACTCT GGGGAGCGCA GCCGGTGGTG CTCGCGGCCG GTGATCTTGG CATGGTGCTG
GAGCAGGGAG GTATTGACGC CATGGTTTCA TCCAGTGCCA CCGGCGTCGA CAGCCAGGCT
TGGAAGACCA TGAAGGTGTT TCTGGACATC AAGGCCTGGA TTCCCAAGAA CATGTTGTGC
GTCAGCGAAC TTGCCTGGAA GGGCTTTGCC GAGCCGGAAC GCCAGGCCAT CAGCCGTGCC
GCCGTGCTGG CCGAGAAAGA AGGCTGGGCG CTGGCCCAGC AGGCCGATGA GCTGGGCAAG
AAGGTTCTTG TCGACAACAA GATGTCCGTC ACCGCGCCAT CGGCGGACCT GCGCCGCATG
CTGGATTTGG TGGGGGAGCG CTTTGGCCGG GAGTGGGTGG CCAAGGCTGG CAGCAGCAAT
ATGTCTGTGC TGATGGAATA CAACAAGAAA AGGCACTGA
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| Protein sequence | MTVSRRTLIS ALAPAALQLT AGAAWSKGHR LQLSAAYGDG IFHTQNLRNF AARVHADTQQ
ALEIDVVSNS ALKPMAQVLP ALKRNEIQFG EVLMSSYVDM HPLLGMDSLP FIVRGFDEAA
RLWQLTRPVL QEFLLAQQGV RLLFAVPWPA QGLFCRRPVN SIVDLKGLRL RVQSDATKRL
AELWGAQPVV LAAGDLGMVL EQGGIDAMVS SSATGVDSQA WKTMKVFLDI KAWIPKNMLC
VSELAWKGFA EPERQAISRA AVLAEKEGWA LAQQADELGK KVLVDNKMSV TAPSADLRRM
LDLVGERFGR EWVAKAGSSN MSVLMEYNKK RH
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