| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5331 |
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| Symbol | |
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| ID | 5750943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5913955 |
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| End bp | 5916423 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300456 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001566345 |
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| Protein GI | 160900763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCGA TCGATCTGCT CGACGGCGCC TCCGGTGCCG CACCCGCCTC CAACTCCCCT
TTGCTGGCCA ACCTCAACGA AGAGCAGCTT GCTGCCGTCA CGCTTCCGGC CGGCCACGCG
CTGATCCTGG CAGGTGCGGG CTCGGGCAAG ACGCGGGTGC TGACCACGCG CATCGCCTGG
CTGCTGCAGA CGGGCCAGGC CACGCCGGGC TCCATCCTGG CCGTGACCTT CACCAACAAG
GCGGCCAAGG AAATGCTGGC CCGCCTGTCG GCCATGCTGC CCTACAACGT GCGCGGCATG
TGGATCGGCA CCTTCCACGG CCTGTGCAAC CGGCTGCTGC GCGCCCACCA CCAGGCGGCA
AAGCTGTCGT CCACCTTCCA GATCCTGGAC ACGCAGGACC AGCTGTCGGC CGTCAAGCGC
CTGTGCAAGC AGTTCAACGT GGACGACGAG CGCTTCCCGC CCAAGCAGCT GCAGTACTTC
ATTGCCGGCT GCAAGGAAGA GGGCATGCGC CCCGGCGACG TGGTGGCCAA TGACCCGGAC
ACGCGCAAGA AGGTCGAGAT CTACCAGCTC TACGAGGAGC AGTGCCAGCG CGAGAGCGTG
GTCGATTTCG GCGAGCTGAT GCTGCGCTCC TACGAGCTGC TGCGCGACGA TGCCGCGCTG
CGCGCCCACT ACCAGCGGCG CTTTCGCCAC ATCATGGTCG ACGAGTTCCA GGACACCAAC
AAGCTGCAGT ACCAGTGGCT CAAGCAGCTG GCGGGCGACA TGGTGGATGG CCGCCTGCAG
GCCACGGGCA GCGTGATCGC CGTGGGCGAC GACGACCAGA GCATCTACGC CTTTCGCGGT
GCGCGCGTGG GCAACATGCA GGACTTCGTG CGCGAGTTCG ACGTGCGCCA GCAGATCAAG
CTGGAGCAGA ACTACCGCTC CTACAGCAAC ATCCTGGACT GCGCCAACGC GCTCATCAGC
CACAACAGCC AGCGCCTGGG CAAGAACCTG CGCACCACCC AGGGCCCGGG CGAGCCCGTG
CGCATCTACG AGGCGCCCAC GGACATGGCC GAGGCGCAGT GGATGGTCGA GGAAATCCAG
CAGCTCGTGA AAAAGGACGG CTGGCAGCGC CAGGAAATCG CCGTGCTCTA CCGCAGCAAT
GCGCAAAGCC GGGTGATCGA GTCGCAGCTG TTCAATGCCG CCATTCCCTA CCGCGTGTAC
GGCGGGCTGC GCTTTTTCGA GCGCGCCGAA ATCAAGCATG CGCTGGCCTA CCTGCGCCTG
CTGGAGAACC CGCACGACGA CACCAGCTTT CTGCGCGTGG TGAACTTCCC GCCGCGCGGC
ATCGGCGCGC GCAGCGTGGA GACGCTGCAG GACGCGGCGC GCAGCGCGGG CTGCTCGCTG
CACGATGCCG TCTCGGCGGT GCCGGGCGCG CCGGGCACCA AGCTCGCAGG CTTTGTCGCC
AAGATCGACG TGCTGCGCGA GCAGACCCAG GGCCGCACGC TGCGCGAGAT CATCGAGGCC
ATCGAGGAAG AAAGCGGCCT GCTCGAGCAC TACCGCAACG AAAAGGAAGG CGCCGACCGC
ATCGAGAACC TGCAGGAACT CGTGAACGCG GCCGAGAGCT TTGTCACCCA GGAAGGCTTT
GGCCGCGACG CCGTGGCCCT GCCGCTGGAC GAGCACGACG GCGCCAGGGC ACTGACGCAA
AGCCCCGCCA GCCAGGGCCT GGACCCTGCG CTGCCGCTGC TGGACACGCC GCTCACGCCG
CCGGCCGGCA CCGTGGCCGG CATGGTTGAT GCCGATACCG GCGAGACACT GTCGCCGCTG
GCCGCCTTCC TGACGCACGC GGCGCTGGAG GCTGGCGACA ACCAGGCCCA GGCCGGCCAG
GACGCCGTGC AACTGATGAC CGTGCATGCC TCCAAGGGGC TGGAGTTCGA CGCCGTCTTC
ATCGGCGGCG TGGAAGAGGG CCTGTTCCCG CATGAGAACG CCATGATGGA CCGCGGCGGC
CTGGAGGAAG AACGCCGCCT GGCCTATGTG GCCATCACCC GCGCGCGCAA GCGCCTGTAC
CTGAGCCATT CGCAGACGCG CATGCTGCAC GGGCAGACGC GCTACAACGT CAAGAGCCGC
TTCTTCGACG AGCTGCCCGA TGAGGCGCTC AAGTGGATCA CCCCCAAGCA GGGCGGCTTT
GGCAGCTACG CGCCCCGCCC CGGTGGCGGC GGTGGTGGCA GCTATGGTTC ACGCGATCGC
GGCGGCTTCG GCAACAAGGC CGAAGGCTGG CGCAGCGAGG TCTTCGCCAG CCCGCCCGTG
CCGCCGCAAA AGGCTGCTCC GGGCCACGGC CTGCGCGTGG GCCTGAACGT GTTCCACAAC
AAGTTCGGCG AAGGCAAGGT GCTGGCCCTG GAAGGCACGG GCGACGACGC GCGCGCCCAG
GTCAGCTTTG GGCGCCACGG CACGAAGTGG CTGGCGCTGT CCATTGCCAA GCTCACGGTC
GTGGAGTGA
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| Protein sequence | MFPIDLLDGA SGAAPASNSP LLANLNEEQL AAVTLPAGHA LILAGAGSGK TRVLTTRIAW
LLQTGQATPG SILAVTFTNK AAKEMLARLS AMLPYNVRGM WIGTFHGLCN RLLRAHHQAA
KLSSTFQILD TQDQLSAVKR LCKQFNVDDE RFPPKQLQYF IAGCKEEGMR PGDVVANDPD
TRKKVEIYQL YEEQCQRESV VDFGELMLRS YELLRDDAAL RAHYQRRFRH IMVDEFQDTN
KLQYQWLKQL AGDMVDGRLQ ATGSVIAVGD DDQSIYAFRG ARVGNMQDFV REFDVRQQIK
LEQNYRSYSN ILDCANALIS HNSQRLGKNL RTTQGPGEPV RIYEAPTDMA EAQWMVEEIQ
QLVKKDGWQR QEIAVLYRSN AQSRVIESQL FNAAIPYRVY GGLRFFERAE IKHALAYLRL
LENPHDDTSF LRVVNFPPRG IGARSVETLQ DAARSAGCSL HDAVSAVPGA PGTKLAGFVA
KIDVLREQTQ GRTLREIIEA IEEESGLLEH YRNEKEGADR IENLQELVNA AESFVTQEGF
GRDAVALPLD EHDGARALTQ SPASQGLDPA LPLLDTPLTP PAGTVAGMVD ADTGETLSPL
AAFLTHAALE AGDNQAQAGQ DAVQLMTVHA SKGLEFDAVF IGGVEEGLFP HENAMMDRGG
LEEERRLAYV AITRARKRLY LSHSQTRMLH GQTRYNVKSR FFDELPDEAL KWITPKQGGF
GSYAPRPGGG GGGSYGSRDR GGFGNKAEGW RSEVFASPPV PPQKAAPGHG LRVGLNVFHN
KFGEGKVLAL EGTGDDARAQ VSFGRHGTKW LALSIAKLTV VE
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