| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5309 |
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| Symbol | |
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| ID | 5750921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5880667 |
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| End bp | 5881611 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300434 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001566323 |
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| Protein GI | 160900741 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0311783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.649515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTCG AATACTCTAC CCATTCGCAG GAGCCACGCC ATCGTTTCGA CTACTGGCAC
GAGGTGGTCT GCCGCCACTG CATCCCGGCC GACAGCCACC GCGCGCAGGG GGACGCCGCA
GGTCCCGGCG GCTTCGGGGC CACGCTGTCC GTGCGGTCCC TGGGACTGCT GGAGATCAGT
GCCATGTCGG CGCCCAGCCA CCGCTGGGTG CGCAACGCAG CCCACCTGCG CCTGCATGCC
CGCGACGAGC TGTGGCTGGG CTATCTGCTC CAGGGCCAGG CCGAGGTGCG CCAGGGCGGG
CAAGTGGCCC GGCTGAGTGC GGGCAATCTG GTGCTTTATG ACGCTTCGCA GCCTTTCGAA
TTCTCGGTGG CGCCCCGCGA TATCCTGCTG ATGCGCATTC CGCGCAGCGA ATTGTTGAAT
CGCTTTGCCC GTGCACCCTT GCACGCGGGC CGGGTGCTGC ATGGCCATGC CCCGGCCGTG
GCGCCGCTGC GGGCCATGCT CGGCGAGGCC ATCGCCATGC CGCCTGCGCC GCACGGTGAT
GCCTTGGCGC AGCGCTTCGG CATGGCGCTG CTCGACGTGC TGGCCCTGGC GCTGGAGATG
CAGGAAATGG CCGTGCAGCC CCGCGCGGAA AGGGACCTGC ATGGCCGCAT CCAGGCGTTC
ATCCAGGACA ACCTGGGCTC GCCCGAGCTG TCGCTGCAAT GGCTGGCGCA GCAGCACAAC
GTCTCGCCGC GTACCGTGAC ACGGGCCTTT GCGCGGCGCA ACCAGACGCC CATGGGCCTG
GTATGGCAGC TGCGGCTGCA GGCCAGCCGC CAGGCCCTGA TGCAGGGGCG CTGCTCCAGC
GTGACCGAGG CGGCCTTCGC GCATGGATTC TCCGATGCGG CGCACTTCAG CCGAGCCTTT
CGCAAAGCGT TCGGCTGCAC GCCCCGCAGC CTGCTGGCCG CCTGA
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| Protein sequence | MQLEYSTHSQ EPRHRFDYWH EVVCRHCIPA DSHRAQGDAA GPGGFGATLS VRSLGLLEIS
AMSAPSHRWV RNAAHLRLHA RDELWLGYLL QGQAEVRQGG QVARLSAGNL VLYDASQPFE
FSVAPRDILL MRIPRSELLN RFARAPLHAG RVLHGHAPAV APLRAMLGEA IAMPPAPHGD
ALAQRFGMAL LDVLALALEM QEMAVQPRAE RDLHGRIQAF IQDNLGSPEL SLQWLAQQHN
VSPRTVTRAF ARRNQTPMGL VWQLRLQASR QALMQGRCSS VTEAAFAHGF SDAAHFSRAF
RKAFGCTPRS LLAA
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