Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5308 |
Symbol | |
ID | 5750920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5879135 |
End bp | 5880535 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641300433 |
Product | amidase |
Protein accession | YP_001566322 |
Protein GI | 160900740 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.459659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.900002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA GCGAACTGCA CCATCTCGAA CTGCTGGAGG TGGGGCGTGA GATCCAGTCC CGCCGCATTT CCTCGGAAGA GGTGACCCGC CACATGCTGG CGCGCATCGA GGCCGTGGAC GCGCGGCTGC ACAGCTACGT GACGGTGATG GCGCAGCAGG CGCTGGAGGA CGCCCGCCGC GCCGACGCGG AGATCGCGCA GGGCCGCCGC CGTGGTGCGC TGCACGGCGT GCCGCTGGCG CTCAAGGACC TGCTGTGGAC CCGGGGTGTC CCCACCACGC ATGGAATGAC GCTGCACCGC GAGCATCGCC CCACGGAAGA TGCCACCGTG GTGCGCAGGC TGCGCGAGGC CGGCGCCGTC ATCCTGGGCA AGCTGCAGCA GACCGAAGGC GCCTTTGCCG ACCACCATCC CGAGATCACT GCCCCCGTCA ACCCCTGGGG AGCCCAGCTG TGGCCCGGGG CCTCGTCCAG CGGCTCGGGC GTGGCCACGG CGGCGGGGCT GTGCTTCGGA TCGCTGGGCA CGGACACCGG GGGCTCCATC CGCTTTCCAT CGGCCGCCAA CGGCATCACG GGGCTCAAGC CCACCTGGGG CAGGGTGAGC CGCCACGGCG CCTTCGAATT GGCCGCGTCC CTGGACCACA TAGGCCCGAT GGCGCGCAGT GCCGCCGATG CCGCAGCCAT GCTTGCGGCC ATCGCCGGGG CGGACCCGCT GGACCCTACG GCCAGCCAGT GCAGCGTGCC CGACTATCTG GCCATGATGA CGCGCGGATT CTCCGGCCTG CGCCTGGGTA TGGACCGGCA ATGGGCACTG GACGGCGTGG ATGCCCCCTC CCGCCAGGCG GTGGAGCAGG CCCTGGCGGT GGCGCAGCGC CTGGGGGCCA GCGTGCAGGA AGTCCGCTTT CCCGATGCCA CCCAGGCGGT GCAGGACTGG CCGGCGCTGT GCGCGGTGGA GACCGCCGTG GCGCACGGCG CCACGTTCCC TGCACGGCGC GAGGCCTATG GCCCCGGGCT CGCCGGGCTG ATCGACCTGG GGCTGGGCCT GTCCGCCACC GACTACCAGC GGCTGCTGCT GCGCCGCGCG GACTTCACGG GCCGGGTGCG CGCACTCTTC GCGCAGGTGG ACCTGCTGCT GGTTCCCGCC ACGGCCTTTG CGGCCCCCAC GCTGCAACGC ATGGCGCATT TCGGCTCCGA TGCCGAGCTG TTCTCGGGCA TGCTGCGCTA CACATGCCCC TTCGACCTGA CGGGCAGCCC CACGATCACG CTGCCCGGAG GACGCACTCC TGAGGGCGCG CCCGTGGCCT TCCAGTTCGT GGCCCCCGAC TTCCGCGAAG ACCTGCTGGT GCGCGCGGGC TGGGCGTTCC AGCAGGCCAC GGACTGGCAC AGACAGCACC CTGCTGCCTG A
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Protein sequence | MNDSELHHLE LLEVGREIQS RRISSEEVTR HMLARIEAVD ARLHSYVTVM AQQALEDARR ADAEIAQGRR RGALHGVPLA LKDLLWTRGV PTTHGMTLHR EHRPTEDATV VRRLREAGAV ILGKLQQTEG AFADHHPEIT APVNPWGAQL WPGASSSGSG VATAAGLCFG SLGTDTGGSI RFPSAANGIT GLKPTWGRVS RHGAFELAAS LDHIGPMARS AADAAAMLAA IAGADPLDPT ASQCSVPDYL AMMTRGFSGL RLGMDRQWAL DGVDAPSRQA VEQALAVAQR LGASVQEVRF PDATQAVQDW PALCAVETAV AHGATFPARR EAYGPGLAGL IDLGLGLSAT DYQRLLLRRA DFTGRVRALF AQVDLLLVPA TAFAAPTLQR MAHFGSDAEL FSGMLRYTCP FDLTGSPTIT LPGGRTPEGA PVAFQFVAPD FREDLLVRAG WAFQQATDWH RQHPAA
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