Gene Daci_5308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5308 
Symbol 
ID5750920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5879135 
End bp5880535 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content72% 
IMG OID641300433 
Productamidase 
Protein accessionYP_001566322 
Protein GI160900740 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.459659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.900002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA GCGAACTGCA CCATCTCGAA CTGCTGGAGG TGGGGCGTGA GATCCAGTCC 
CGCCGCATTT CCTCGGAAGA GGTGACCCGC CACATGCTGG CGCGCATCGA GGCCGTGGAC
GCGCGGCTGC ACAGCTACGT GACGGTGATG GCGCAGCAGG CGCTGGAGGA CGCCCGCCGC
GCCGACGCGG AGATCGCGCA GGGCCGCCGC CGTGGTGCGC TGCACGGCGT GCCGCTGGCG
CTCAAGGACC TGCTGTGGAC CCGGGGTGTC CCCACCACGC ATGGAATGAC GCTGCACCGC
GAGCATCGCC CCACGGAAGA TGCCACCGTG GTGCGCAGGC TGCGCGAGGC CGGCGCCGTC
ATCCTGGGCA AGCTGCAGCA GACCGAAGGC GCCTTTGCCG ACCACCATCC CGAGATCACT
GCCCCCGTCA ACCCCTGGGG AGCCCAGCTG TGGCCCGGGG CCTCGTCCAG CGGCTCGGGC
GTGGCCACGG CGGCGGGGCT GTGCTTCGGA TCGCTGGGCA CGGACACCGG GGGCTCCATC
CGCTTTCCAT CGGCCGCCAA CGGCATCACG GGGCTCAAGC CCACCTGGGG CAGGGTGAGC
CGCCACGGCG CCTTCGAATT GGCCGCGTCC CTGGACCACA TAGGCCCGAT GGCGCGCAGT
GCCGCCGATG CCGCAGCCAT GCTTGCGGCC ATCGCCGGGG CGGACCCGCT GGACCCTACG
GCCAGCCAGT GCAGCGTGCC CGACTATCTG GCCATGATGA CGCGCGGATT CTCCGGCCTG
CGCCTGGGTA TGGACCGGCA ATGGGCACTG GACGGCGTGG ATGCCCCCTC CCGCCAGGCG
GTGGAGCAGG CCCTGGCGGT GGCGCAGCGC CTGGGGGCCA GCGTGCAGGA AGTCCGCTTT
CCCGATGCCA CCCAGGCGGT GCAGGACTGG CCGGCGCTGT GCGCGGTGGA GACCGCCGTG
GCGCACGGCG CCACGTTCCC TGCACGGCGC GAGGCCTATG GCCCCGGGCT CGCCGGGCTG
ATCGACCTGG GGCTGGGCCT GTCCGCCACC GACTACCAGC GGCTGCTGCT GCGCCGCGCG
GACTTCACGG GCCGGGTGCG CGCACTCTTC GCGCAGGTGG ACCTGCTGCT GGTTCCCGCC
ACGGCCTTTG CGGCCCCCAC GCTGCAACGC ATGGCGCATT TCGGCTCCGA TGCCGAGCTG
TTCTCGGGCA TGCTGCGCTA CACATGCCCC TTCGACCTGA CGGGCAGCCC CACGATCACG
CTGCCCGGAG GACGCACTCC TGAGGGCGCG CCCGTGGCCT TCCAGTTCGT GGCCCCCGAC
TTCCGCGAAG ACCTGCTGGT GCGCGCGGGC TGGGCGTTCC AGCAGGCCAC GGACTGGCAC
AGACAGCACC CTGCTGCCTG A
 
Protein sequence
MNDSELHHLE LLEVGREIQS RRISSEEVTR HMLARIEAVD ARLHSYVTVM AQQALEDARR 
ADAEIAQGRR RGALHGVPLA LKDLLWTRGV PTTHGMTLHR EHRPTEDATV VRRLREAGAV
ILGKLQQTEG AFADHHPEIT APVNPWGAQL WPGASSSGSG VATAAGLCFG SLGTDTGGSI
RFPSAANGIT GLKPTWGRVS RHGAFELAAS LDHIGPMARS AADAAAMLAA IAGADPLDPT
ASQCSVPDYL AMMTRGFSGL RLGMDRQWAL DGVDAPSRQA VEQALAVAQR LGASVQEVRF
PDATQAVQDW PALCAVETAV AHGATFPARR EAYGPGLAGL IDLGLGLSAT DYQRLLLRRA
DFTGRVRALF AQVDLLLVPA TAFAAPTLQR MAHFGSDAEL FSGMLRYTCP FDLTGSPTIT
LPGGRTPEGA PVAFQFVAPD FREDLLVRAG WAFQQATDWH RQHPAA