| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5302 |
|---|
| Symbol | |
|---|
| ID | 5750914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5873547 |
|---|
| End bp | 5874416 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641300427 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001566316 |
|---|
| Protein GI | 160900734 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.974618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA TCCTCACCTG GAACACCCAA TGGTGCCTGG GCCTGGACGG CCGCATGGAC
CCGGAGCGCA TCGTGGCGCA TGCGCTGTCC ATGGCCGATA TCGACGTGCT GTGCCTGCAG
GAAATCGCCG TCCACTATCC GGGCCTGCAA GGCGCGCCCG GCGACCAGGT GGAGCAGGTG
CGCGCGGCCC TGCCCGAAGG CTGGAAGGTC TTCTTCGGCG CGGCCGTGGA CGAATTCACG
GCCGTGGGCC GGCAGCGCTT TGGCAACCTG GTGGCCACGC GCCTGCCGGT GCTGCAACTG
GCCCACCACC GCCTGCCGTA TCCGCACGAC GGCGGCGTGC GCAGCATGCC GCGCTGCTGC
ACGGCGGCCA CGGTGATGGA TGCCGCGCTG GGCCCCGTGC GGGTGATGAG CACCCACCTC
GAATATTTCT CGCGCCGCCA GCGCATGGCC CAGGCGCTGG CGCTGCGTTC CCTGCAGATC
GAGGCGCTGG GCCAGGCCGA GGCGCCGCCC CAGCCTGCCA GCGACGGCTC GCCCCAGCAG
ACCAAGCCGC ACACGCCGCA TGCCGTGCTC TGCGGCGACT TCAACTTCGA GCCGCACGAG
GACGAATACG CCGGCCTGTC CCGGCCCTGG GCGGCCGGAG AGGAAGGCGC CCTGACCGCC
GGCCAGTGGC ACAACAGCTG GAGCGTGCTG CACCCGGACC AGCCCCAGCC GCCCACCTTC
AGATTGTTCG ACCGCCAGTG GGGCCCCGAG CCCGGCGCCT GCGATTTCGC CTGGGTCAGC
GACAGCCTGC GCGGCCATGT GCGTGGCTGG GCCGTGGACA GTGACACAAG GCTCTCGGAC
CACCAGCCCG TGCTGCTGCA GCTGGCTTGA
|
|---|
| Protein sequence | MMQILTWNTQ WCLGLDGRMD PERIVAHALS MADIDVLCLQ EIAVHYPGLQ GAPGDQVEQV
RAALPEGWKV FFGAAVDEFT AVGRQRFGNL VATRLPVLQL AHHRLPYPHD GGVRSMPRCC
TAATVMDAAL GPVRVMSTHL EYFSRRQRMA QALALRSLQI EALGQAEAPP QPASDGSPQQ
TKPHTPHAVL CGDFNFEPHE DEYAGLSRPW AAGEEGALTA GQWHNSWSVL HPDQPQPPTF
RLFDRQWGPE PGACDFAWVS DSLRGHVRGW AVDSDTRLSD HQPVLLQLA
|
|---|
| |