Gene Daci_5296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5296 
Symbol 
ID5750908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5867168 
End bp5868181 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content71% 
IMG OID641300421 
ProductMarR family transcriptional regulator 
Protein accessionYP_001566310 
Protein GI160900728 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGC ACGATCTTTC CCTGGTGGAT GGCATCCGCG CCGCCTCGCG CCAGATGGTG 
CGCGAGCTGG GCTTCATGCA GGCCACGCTG GCGGCCACCG ACTATCCGCC CTCGGCCGTG
CATGCCATCC TGGAGATCGG CACACAGGGG CGCATGGCGG CCTCGCAGCT GGCCCAGGCG
CTGGGCCTGG AGAAATCCAG CGTCAGCCGC ATGGTGCGCA AGCTGGTGGA GGCGGGCGAG
CTGAAGGAGG CCGCCGATGG CGAGGATGGC CGCGTCAAGC AGTTGGCCCT GACCGCCAAG
GGCCGGCGCA CGCTGGCCGC CATCGAGGCC TTCGGGCGCC AGCAGGTGAC GGCGGCGCTG
GACCGCATGC AGGCGCCGCA GCAGCAGGCC GTCGCCCAAG GGCTGGCACT GTACGCCCGG
GCGCTGCAGG CGCACCGGCA GGAGGAGCCC CTGCCCCAGC CCCAGCCCGT ACCCGTGCCC
GCGCAGATAC AGGTCCTGCC CGGATACCGG CCCGGCTGCC TGGGCCGCAT CGTGGACATG
CATGCGCGCT TTTATGCGCG CCACGCAGGC TTTGGCGTCT TCTTCGAAAG CCGCGTGGCC
AGCGGCCTGG CCGAGTTCGC AGGCCGGCTG GACAAGCCCT GCAACCAGCT GTGGACGGCG
CTGGACGGCG ACCGCATCGT GGGCTCCGTG GCCATCGATG GAGAGGACCT GGGCAAGCAC
CCCGAAGGCC GCCAGGCGCA TCTGCGCTGG TTCATCCTGG AAGACGGCCT GCGCGGCGCC
GGCACGGGGC GCCAGCTGCT TCAGCAGGCC CTGGCGTTCT GCGACCAGCA GGCCTTCGAG
GCCACCCAGC TGTGGACCTT CCGGGGCCTG GATGCAGCAC GCCGGCTCTA CGAATCGTCA
GGCTTCACCC TGGCCGAGGA ATGGCCAGGC CAGCAATGGG GCGAGCCAGT GATCGAGCAG
CGCTTCGTGC GGCCCCGCCC TGCCGTGGCG GCATGGGCAG GCCAGGCACC CTGA
 
Protein sequence
MPQHDLSLVD GIRAASRQMV RELGFMQATL AATDYPPSAV HAILEIGTQG RMAASQLAQA 
LGLEKSSVSR MVRKLVEAGE LKEAADGEDG RVKQLALTAK GRRTLAAIEA FGRQQVTAAL
DRMQAPQQQA VAQGLALYAR ALQAHRQEEP LPQPQPVPVP AQIQVLPGYR PGCLGRIVDM
HARFYARHAG FGVFFESRVA SGLAEFAGRL DKPCNQLWTA LDGDRIVGSV AIDGEDLGKH
PEGRQAHLRW FILEDGLRGA GTGRQLLQQA LAFCDQQAFE ATQLWTFRGL DAARRLYESS
GFTLAEEWPG QQWGEPVIEQ RFVRPRPAVA AWAGQAP