| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5293 |
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| Symbol | |
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| ID | 5750905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5862195 |
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| End bp | 5863895 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300418 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001566307 |
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| Protein GI | 160900725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA ATCCCGCGTC CCGATACCTT ACCTTCCCTT CCGTCGACCT GCCCGAGCGC
CAATGGCCCT CACGCCAGTT GAGCCAGGCG CCCGTGTGGC TGTCCACCGA CCTGCGCGAT
GGCAACCAGG CCCTGTTCGA GCCCATGAAC CGCGAGCGCA AGCTGCGCCT GTTCCATGAA
CTGGTGCGCA TAGGCTTCAA GGAGATCGAG GTGGGCTTTC CCTCGGCCTC GCAGACCGAC
TACGGCATCG TGCGCCACCT GATCGACAAC GGGCTGATCC CCGGCGACGT GACGCCCATG
GTCATCACCC AGCTGCGCGA GGACCTGATC CGCGCCACGG TGGACAGCGT GGCCGGAGCG
CGGCGCGCCA TCGTGCACTT CTACAACGCC ATTGCCCCGG CCTGGCGCGA GATCGTCTTC
GGCATGCAGG TGCCCGAGAT CATCGCCATG GTGGAGCACC ACATCGCCCT GCTGCGCGAA
CTGACCGATG CCCACCCCGA GACCGAATGG GTTCTGCAGT ACTCGCCCGA GACCTTCTGC
ATGGCCGAGC TCGACGTGTC GCTGGCCGTG TGCAACGCGG CCATCCGCGC CTGGGATGCA
GGCCCCGCGC GGCCCATGAT CATCAACCTG CCGACCACGG TGGAAGTGAG CACGGCCAAT
GTCTTCGCCG ACCAGATCGA GTGGATGCAC CGCCGCCTGG AACGGCGCGA GCACATTGTG
CTGTCCGTGC ACCCGCACAA CGACCGGGGC ACGGGCGTGG CCTGCGCCGA GCAGGCGCTG
CTGGCGGGAG CCCAGCGCGT GGAAGGCTGC CTGTTCGGCA ATGGCGAGCG CAGCGGCAAC
CTCGATGTGG TGACGCTGGC GCTGAACCTC TACACGCAGG GCATCGCGCC GGGACTGGAC
TTCTCGGACA TCGCCGCCGT GGCGCGCATT GCGGAGGAAT GCACGGCCCT GCCCATCCAC
CCGCGCCACC CCTATGTGGG CGACCTGGTG TTCACGGCGT TCTCGGGCTC GCACCAGGAC
GCCATCGCCA AGGGCTTTGC GGTTCAGCGG CCCGATGCGC CCTGGCGCGT TCCCTACCTG
CCCATCGACC CGCAGGACCT GGGCCGCACC TACGACAGCA TCGTTCGCGT CAACAGCCAG
TCGGGCAAGG GCGGCATTGC CTTTTTGCTG CAGCGCGACC ATGGCGTGAC CATGCCGCGC
CGCATGCAGG TGGAGTTCAG CGCCGTGGTG CAAAAACAGG CGGATGCCTG CGAGGCCGAG
CTGGCCAGCG ACGACCTGTG GAAGCTGTTC GAAGCCACCT ACCTCGCACC CCTGCAGCTT
CCCTGGCACT ACCGCAGCCA CCACCTGTTC GACAGCGCCC AGGGCCAGGG CATTGCGCTG
GAAGTGGTGC GGCCAGACGG CCTTCGACTG CAGCTGTATG GCGAAGGCAG CGGCCCCATC
GATGCCGTGG CCGCCGCCCT CGGCCAGCAC CTGGGCGTGG CGCTGCGCAT TGACCACTAC
GAGGAGCGCA GCCTGGGCCA GGGCGCCGGG GCCATGGCGC TGGCCATCGT CGAGGCCGCC
CTGCCCGGCG TGGCGGGCAC GCGCTTCGGT GCGGGGCGCC ATGCCAACAT CGTGACCGCG
TCCATCCTGG CCGTGCTGCA TGCGGCGGGC CGGCTGGTGG CGGCGCAGCC GGAAAGCCGG
CGCGTACCTG CCCAAGCCTG A
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| Protein sequence | MLKNPASRYL TFPSVDLPER QWPSRQLSQA PVWLSTDLRD GNQALFEPMN RERKLRLFHE
LVRIGFKEIE VGFPSASQTD YGIVRHLIDN GLIPGDVTPM VITQLREDLI RATVDSVAGA
RRAIVHFYNA IAPAWREIVF GMQVPEIIAM VEHHIALLRE LTDAHPETEW VLQYSPETFC
MAELDVSLAV CNAAIRAWDA GPARPMIINL PTTVEVSTAN VFADQIEWMH RRLERREHIV
LSVHPHNDRG TGVACAEQAL LAGAQRVEGC LFGNGERSGN LDVVTLALNL YTQGIAPGLD
FSDIAAVARI AEECTALPIH PRHPYVGDLV FTAFSGSHQD AIAKGFAVQR PDAPWRVPYL
PIDPQDLGRT YDSIVRVNSQ SGKGGIAFLL QRDHGVTMPR RMQVEFSAVV QKQADACEAE
LASDDLWKLF EATYLAPLQL PWHYRSHHLF DSAQGQGIAL EVVRPDGLRL QLYGEGSGPI
DAVAAALGQH LGVALRIDHY EERSLGQGAG AMALAIVEAA LPGVAGTRFG AGRHANIVTA
SILAVLHAAG RLVAAQPESR RVPAQA
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